KEGG   Acidobacterium capsulatum: ACP_0611
Entry
ACP_0611          CDS       T00868                                 
Symbol
priA
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
aca  Acidobacterium capsulatum
Pathway
aca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ACP_0611 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aca03400]
    ACP_0611 (priA)
Enzymes [BR:aca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACP_0611 (priA)
DNA repair and recombination proteins [BR:aca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ACP_0611 (priA)
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C AAA_16 PriA_CRR AAA_30 AAA_22 ATPase_2 AAA_19 YjdM_Zn_Ribbon GlnD_UR_UTase
Other DBs
NCBI-ProteinID: ACO34403
UniProt: C1F1L0
Position
complement(698557..701034)
AA seq 825 aa
MPAFCDVALPVPLDRAFTYSTGLFAPEVGARVLVPFRNEKLSGIVLRLHDDPPPVEAKPL
LAVMDEQSILSPQLLDLARWIAQYYVAPIGEVLRAMLPLIAEVRRHVLYRITDTGREALF
AGAQQGSSRRSRLPAAEQDREYAVLNYLESGDPARVSAIRSKTGASIDLLRGMLRKKWLA
RETAAETRTAQRTMRVARLAQSLDGEARLPRLNENQQTILAALAGIDGGVPVAQLRELDV
PDSTLGTLVRRGLVAIEERPVDFLMSGLSIRHHGEHKLIEAQQQALAQITGSVEEGGFRP
YLLHGVTGSGKTAVYLAAMRHALERGKSSILLVPEIGLTPQMAAQLHRAFGSEVALLHSA
LLPEERAEQWHRIRRREARVVVGTRSAIFAPVEDLGLILVDEEHDGSYKQESVPRYHARD
VAVMRAKLAGATVVLGSATPSLESWNNAIEGKYTRIEMHERIHQRPMPEVELVDMRREFQ
ETGAEHLFSRTLIDQTQATLDRGEQAIVLLNRRGYSFVVLCRACGEKLQCENCSISLTYH
KAVTDAEAHAPVGQRLECHYCGYKRTIPQRCPKCDSEHLYFLGAGSQQGEERLQEIFPGA
RIGRMDRDTVRGRGDLERLLAKLHSGEINLLVGTQMIAKGHDIHGVTLVGVVGADHALGL
PDFRAAERTFQLLTQVAGRAGRGELPGKVIVQTYYPEHYAVECARQHDFHSFAERELKYR
RWMRYPPYAAITNVLLQSEDFGQLAHWAAALGRWLSAAEFPDVRVLGPATAPIARIKRMH
RMHLLLKSQSRQSLQRVLRLLRHHAEEVGIPPRNLIIDVDAVHLM
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgcccgccttctgcgacgtcgcgctgcccgttccgctcgatcgcgccttcacttactcc
accggcctcttcgcgcccgaggtgggcgcgcgtgtgctcgtcccgttccgcaatgaaaaa
ctctcaggcatcgtgctgcgcctgcatgatgaccctccgcccgttgaggccaagccgctg
ctcgccgtcatggatgagcaaagcatcctctcgccgcaactgctcgacctcgcccgctgg
atcgcccaatactacgtcgcgcccatcggtgaggtgctgcgcgccatgctgccgctcatc
gccgaggtgcgccgccacgtgctctaccgcatcacagacaccggcagggaagcgctcttc
gccggcgcgcagcaaggctcctcgcgccgctcgcgccttcccgccgccgagcaggaccgc
gaatacgccgtcctcaactatctcgaatccggcgatcccgcgcgcgtctccgccatccgc
tccaaaaccggagcctccattgatctgctgcgcggcatgctgcgcaaaaagtggctcgct
cgcgaaaccgccgccgagacccgcaccgcgcagcgcaccatgcgtgtcgcgcgcctcgcg
cagtcgctcgatggcgaggcccgcctgccgcgcctcaatgaaaatcagcagaccatcctc
gccgccctcgcgggcatcgacggcggcgtgcccgtcgcgcaactgcgcgagctggatgtg
cccgattccacgctcggcacactcgtgcgccgcggcctcgtcgccatcgaagagcgcccg
gtcgacttcctcatgtccggcctctccatacgtcaccatggagagcacaaattaatcgag
gcgcagcagcaagccctcgcacagatcaccggttctgttgaagaaggtggattccgccct
tatctcctgcacggcgtcaccggctccggaaaaaccgccgtctatctcgccgccatgcgc
cacgcgctcgagcgcggcaagtcctccatcctgctcgtgcctgagatcggcctcactccg
caaatggccgcgcagctccatcgtgccttcggctctgaggtggcgctgctgcactcggcg
ctgctgcctgaggagcgcgccgagcaatggcatcgcatccgccgccgcgaggcccgcgtc
gtcgtcggcacccgctcggctatctttgcacccgtcgaagacctcggcctcatcctcgtc
gatgaagagcacgatggcagctacaaacaggagtcagtcccgcgctaccacgcccgcgac
gtcgccgtcatgcgcgccaagctcgccggagccaccgtcgtgctgggctcggccacaccc
tcgcttgagagctggaacaacgccatcgaaggcaaatacacgcgcattgaaatgcacgag
cgcatccaccagcgccccatgcctgaggtggaactggtcgacatgcgccgcgaattccag
gagaccggcgcggagcatctcttctcgcgcaccctcatcgaccagacgcaggccacgctc
gatcgtggcgagcaggccatcgtgctgctcaaccgccgcggctactccttcgtcgtgctc
tgccgcgcctgcggagaaaagctgcagtgtgaaaactgctccatctcgctcacttatcac
aaggctgtcacggatgccgaggcgcacgcccccgtcggccagcgcctggaatgtcactat
tgcggttacaaacgcaccattccccagcgttgccccaagtgcgacagtgagcatctctac
tttctcggtgccggttcccagcagggcgaagagcgcctgcaggaaattttccccggtgcg
cgcatcggccgcatggaccgtgacaccgtgcgcgggcgcggtgacctcgaacgtctgctc
gccaagctccactccggcgaaatcaacctgctcgtcggcacccagatgatcgccaagggt
catgacattcatggcgtcaccctggtcggcgttgttggagccgatcacgcccttggcctg
cccgactttcgcgccgccgagcgcaccttccagttgctcacccaggtcgccggccgcgcc
ggccgcggcgaactgcccggcaaggtcatcgtgcagacctactaccctgagcactacgcc
gtcgagtgcgcgcgccagcacgacttccactcattcgccgagcgcgagctcaaataccgc
cgctggatgcgctatccaccctacgccgccatcaccaacgtgctgctgcaaagtgaagac
ttcggccagctcgcccactgggcggcggctctcggccgctggctctcggcggcggagttc
cccgacgttcgcgtcctcggcccggctaccgcgcctatcgcgcgcatcaagcgcatgcac
cgcatgcatcttctcttgaagtcgcaatcgcgccagtcgctgcagcgcgtgctccgcctg
ctgcgccaccacgccgaagaggtcggcattcccccgcgcaacctcatcatcgacgtcgat
gccgtgcacttgatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (35)   

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