KEGG   Actinoalloteichus fjordicus: UA74_04830
Entry
UA74_04830        CDS       T04639                                 
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
acad  Actinoalloteichus fjordicus
Pathway
acad03420  Nucleotide excision repair
acad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    UA74_04830
   03430 Mismatch repair
    UA74_04830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acad03400]
    UA74_04830
Enzymes [BR:acad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UA74_04830
DNA repair and recombination proteins [BR:acad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UA74_04830
   MMR (mismatch excision repair)
    Other MMR factors
     UA74_04830
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 HHH_5
Other DBs
NCBI-ProteinID: APU13045
Position
1047711..1049789
AA seq 692 aa
MGGQQEPASGLDPEQRAAVLAPRGPVCVLAGAGTGKTRTITRRIAYLVRQGHVAPGQVLA
VTFTKRAAAEMRTRLRALDATGVQALTFHAAALRQLRYFWPRVIGDDQWRLLDSKLPVVA
QAARRAGAGTDRETLRDLASEIEWSKASLITPEDYPAAVARVHRATPAPAEQVVAVYATY
ERLKNEASALDFDDLLLHTAAVMEEHGDVAEEFRDRYRSFVVDEYQDVTPLQQRVLNAWL
GERDDLTVVGDANQTIYSFAGASARPLLDFPRRFPEAAVIRLERDYRSTPEIVSLANRVI
EMARNRPAGSRLRLIGQRPSGPPPAFTEHDDESAEAAAVARRIKNLLAAGTSAGEIAILF
RVNAQSEVYEQALSEADIPYQVRGGERFFARPEVRQAMAALRTDGALSEDRPLPVRVRAV
LARLGLGEQPPEGGAARERWESLRALAELAEETASIAPETDLARFVIELDMRAEARHPPA
MEGVTLASLHAAKGLEWDAVFLVGLAEGTLPIHQADGDDAAVEEERRLFYVGVTRARHHL
SLSWALARAEGGRRYRRRSRFLYGLVPEDHPSSSIGRASAGRVSSRAEAARCRVCASALT
ATMAIKLGRCEHCPADLDQDLLDRLRAWRGDRARKLGVPGFVVLTDATLTAIAEQRPSDV
AALVRIPGIGATKLDRFGGEVISLVLGAGAGS
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgggcgggcagcaggaaccggcgtcgggactcgatccggagcagcgagcggcggtcctg
gctccgcgcggcccggtctgtgtgctggcgggcgccgggaccgggaagacccgcacgatc
acccgccggatcgcgtacctggtccggcaggggcacgtcgcaccgggccaggtgctcgcg
gtcaccttcaccaaacgggcggccgccgagatgcgcacccggctgcgggcgctggacgcc
acgggggtgcaggcactcaccttccacgctgcggcgctgcggcagctgcggtacttctgg
ccgagggtgatcggcgacgaccagtggcggctgctggacagcaagctgccggtggtcgcg
caggcggccaggcgcgcgggtgcaggcaccgatcgcgagacgctacgcgacctggcgagc
gagatcgagtggagcaaggcctcgctcatcaccccggaggactaccccgccgccgtcgcg
cgggtgcaccgggccacgcctgcccccgccgaacaggtcgtcgccgtctacgcgacctat
gagcggctcaagaacgaggcgagcgcactggacttcgatgacctcctgctgcacacggcg
gccgtcatggaggagcacggcgacgtcgccgaggagttccgtgatcgctatcgcagcttc
gtggtcgacgagtatcaggacgtcacgccgctgcagcagcgggtgttgaacgcgtggctt
ggcgaacgagacgacctgacggtggtcggcgatgcgaaccagacgatctactccttcgcg
ggcgcttcggcgcgtccgctgctcgactttccgcgtcgcttccccgaggctgcggtgatc
cggctggaacgcgactaccgctcgacgccggagatcgtgtcgctggccaatcgggtgatc
gagatggcgcggaaccggcctgccgggtcgcggctgcggctgatcggtcagcgcccgtcc
ggtccgccgcccgccttcaccgagcacgacgacgagtcggccgaggcggctgcggtggcc
agacggatcaagaacctcctcgcggcgggcacctcggcgggcgagatcgcgatcctgttc
cgggtgaatgcgcagtcggaggtctacgaacaggccctgagcgaggccgacatcccgtat
caggtgcgcggtggtgagcgcttcttcgccaggccggaggtccggcaggcgatggcggcc
ctgcgcaccgacggcgcgctgtcggaggatcggccgcttccggtgcgggtgcgggcggtg
ctggcgcggctcggcctcggggagcagccgccggagggcggcgcggcgcgggagcgctgg
gaatcgttgcgggcactggcggagctggccgaggagaccgcgagcatcgcaccggagacc
gacctcgcgcggttcgtcatcgagctggacatgcgtgccgaggcccggcatccccctgcg
atggagggcgtcacgctggcgtcgctgcatgccgcgaagggcctggagtgggatgcggtg
ttcctggtcgggctggccgagggcacgctgccgattcaccaggccgacggggacgacgcc
gcagtggaggaggagcgcaggctcttctacgtcggcgtcacccgagcgcggcaccatctg
tcgctgtcgtgggcactggccagggcggagggcggcaggcgctatcggcggcgtagccgt
ttcctgtacgggctggttccggaggatcatccgtcgtcttcgatcggcagggcgagtgcg
ggccgggtgtcctcgcgtgccgaggcggcccggtgtcgggtctgcgcctcggcgttgacg
gcgaccatggcgatcaagctgggccggtgcgaacactgcccggccgatctcgatcaggat
ctgctggatcggctgcgtgcctggcgcggcgatcgagcgcggaagctgggcgttccgggc
ttcgtggtgctcaccgacgcgacgctgacggccatcgccgagcagcgtccctccgacgtc
gccgcgctggtgcggattcccgggatcggcgccaccaagctcgatcgcttcggcggtgag
gtgatctccctggtgctcggtgcgggtgccggctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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