KEGG   Acanthamoeba castellanii: ACA1_155210
Entry
ACA1_155210       CDS       T02667                                 
Name
(RefSeq) premRNA cleavage complex subunit
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
acan  Acanthamoeba castellanii
Pathway
acan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    ACA1_155210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acan03019]
    ACA1_155210
Enzymes [BR:acan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     ACA1_155210
Messenger RNA biogenesis [BR:acan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     ACA1_155210
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N MMR_HSR1 CbiA TniB AAA_16 Sigma54_activat ParA nSTAND3
Other DBs
NCBI-GeneID: 14919313
NCBI-ProteinID: XP_004340614
UniProt: L8H014
Position
Unknown
AA seq 427 aa
MNAPQQTQEMESVRSWHLMRQEELRIEVDKDMTDGTGEIFGTELAKDRAYTFTRCKFALF
SWHGCTIEVTGQCHAYVGKETPMNAYMNVHGMLEEMRDMAERTDKQGPRVMIVGPTDTGK
SSLSRILASYAARLGRTPTVVDLDVGQGSSVPGMIASLPIEKPVDVSEGYEFATPLVYWY
GDVTPGSNPDLYKLQVSNLLRDINRRMELNQAASVGGLIVNTCGWIDGVGYELIRQAIDA
TRATVVLVLDNERLYSDLQQDLSQVQDRRTQVIKLYKSGGVVTRDPNFRRQVEANANVQT
RVDKIREYFYGPSGDLSPHSTLIDFADISIYRIGGGPRAPSSALPIGAERTITPTKLVEV
QPSQEIVHSIIGVSHAKTPEALLETNLAGFLYITDVNVEKKKLTVLAPCPGPLPSRFVVV
GALKWYE
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgaacgcgccacagcagacacaggaaatggagagcgtgcgctcgtggcacctcatgcgc
caggaggagctgcgcattgaagtcgacaaagatatgacggacggcacgggcgagatattc
ggcacggagctggcgaaggaccgagcctacacgttcacccggtgcaagttcgccctcttc
tcgtggcacggctgcaccatcgaagtgacgggccagtgccacgcctacgtgggcaaggag
acgcccatgaacgcctacatgaacgtccacggcatgctcgaggagatgcgcgacatggcc
gagcggacggacaagcagggcccgcgggtgatgatcgtcggcccgaccgacaccggcaag
tcgtccctcagccgcatcctcgcatcctacgccgctcggctcgggcgcacacccaccgtc
gtcgacctcgacgtgggccaaggttcttcggtgcctggcatgatcgcctctttgccaatc
gagaagcctgttgacgtgtctgagggctacgagttcgcgacgccgctcgtgtactggtac
ggcgacgtgacgcccggcagcaaccccgacctctacaagctgcaggtcagcaacctcctg
cgagacatcaaccgccgcatggagctcaatcaagcagcatcggtcggtgggctgatcgtg
aacacgtgcgggtggatcgacggcgtcgggtacgaactcatccgacaggccatcgacgcc
accagggcgaccgtcgtcctcgtcctcgacaacgagcgactctactcggacctccagcag
gacctctcccaggtccaggacaggagaacacaggtgatcaagttgtacaaatctggtggc
gtcgtgacccgagatcccaacttcagacgtcaggtggaggctaacgccaatgtgcagacg
cgggtggacaagattagggagtacttctatggacccagcggcgacctgagcccgcactcg
acgctcatcgactttgccgatatctcgatctaccgcatcggcggcggtccgcgcgcgcca
tcgtccgccctgcccatcggcgccgagcgcaccatcacgcccaccaagctggtcgaggtc
cagccctcccaggagatcgtgcactccatcatcggcgtctcgcacgccaagacgcccgag
gccctgctcgaaaccaacctcgcgggcttcctgtacatcacggacgtcaacgtggagaag
aagaagctcaccgtgctggccccttgccccggacctctccccagccgctttgtcgtcgtg
ggcgccctcaagtggtacgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (71)   

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