KEGG   Acanthamoeba castellanii: ACA1_182810
Entry
ACA1_182810       CDS       T02667                                 
Name
(RefSeq) atpdependent rna helicase ddx10, putative
  KO
K14776  ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
Organism
acan  Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:acan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acan03009]
    ACA1_182810
Enzymes [BR:acan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ACA1_182810
Ribosome biogenesis [BR:acan03009]
 Eukaryotic type
  90S particles
   Helicases
    ACA1_182810
SSDB
Motif
Pfam: DEAD Helicase_C Helicase_C_2 DUF4217 Abhydrolase_1 ERCC3_RAD25_C ResIII
Other DBs
NCBI-GeneID: 14922239
NCBI-ProteinID: XP_004345891
UniProt: L8H7X1
Position
Unknown
AA seq 535 aa
MHRQQQQQHRRGGGHDQQRHRGNRSRDGPAKQRLRRRNDEEEEVALLLRRIEAETPPAGV
NPLVYDDQPAPARAAAEAASGADVEQVEDAAAAATSTGESREFKDLPISSRSLQGLEKGG
WKVMTDIQRATLPHTLAGRDVLAAAKTGSGKTLAFVVLEKLFRMKWTTEDGLGALIISPT
RELALQIFEVLCTAGSNHQLSAVLDEADRILDMGFEKTVNSIVESLPRTRQTLLFSATQT
RSVKQLARLSLKNPEYIAVHEQEQYATPKNLQQNYLVCQLHEKLDTLFSFLKTHTKQKIL
VFISSCKQVRFVYEAFRQLQPGLPVMHLHGKQKQMMRMATYTKFCEQKYACLFATDVAAR
GLDFPNVDWVVQVDCPEDVPTYVHRVGRTARFQAGGRALLFLLPSEQKMADLLKQKVPIQ
EIKVNPRRTLSIQTKLQSILAAEPSLKYLAQKPAKDVFDVNALPAEEFSLSLGLLSSPRI
RFTQSKKGHKNVSYQMQQSLEDAEHEDDEDETTAEPKPPATITAIAAPTCGHGGT
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgcatcggcagcagcagcagcagcatcgcagaggcggcggacacgaccagcagaggcac
cgaggcaatcgcagccgcgacggacccgccaagcagcgactgcgccgcagaaacgacgaa
gaggaggaggtcgccctgctcctacgccgcatcgaagccgagaccccgcctgccggtgtg
aacccgctggtctatgacgaccagccggcaccggcgcgtgccgccgccgaagcagccagc
ggagccgacgtggagcaggtggaggacgccgccgctgcggccacgtccacgggggagtct
cgcgaattcaaggacctcccgatctcatctcgcagcctgcaagggctggagaagggcggg
tggaaggtgatgacggacatccagcgtgccacgctgcctcacacccttgccggacgtgac
gtgctcgccgccgccaagaccggtagcggcaaaactctcgcctttgtcgtgctggagaag
ctgttccggatgaagtggaccacggaggacgggctgggcgccctcatcatctcgcccaca
cgcgagttggccctgcagatctttgaggtcctctgcacggcgggctccaaccaccagctc
tcggcggtgctggacgaagccgaccgcatcctggacatgggcttcgagaagacggtcaac
tcgatcgtggagagcctgcctcgcacgcggcagaccctgctcttctcggccacccagacc
cgatccgtcaagcaattggcgcggttgtcgctgaagaatcccgagtacatagcggtgcac
gagcaggagcagtacgccacgcccaagaacctgcagcagaactacctcgtctgccagctc
cacgaaaagctcgacacgctcttctccttcctcaagacccacaccaagcagaagatcctc
gtcttcatctccagctgcaagcaggtgaggttcgtgtacgaggccttcaggcagctgcag
ccgggcctgcccgtgatgcacctccacggcaagcagaagcaaatgatgcgcatggccacc
tacaccaagttctgcgagcagaaatacgcgtgtctctttgcgacggacgtggcggcgaga
gggctggacttccccaacgtggattgggtggtgcaggtggactgcccggaggacgtgccc
acctatgtgcaccgcgtcgggcgcaccgccaggttccaagcgggcgggcgtgcgttgctg
ttcctgctgccctccgagcaaaagatggccgacctcctcaagcaaaaggtgcccatccag
gaaatcaaggtgaacccgcggcgcaccctgtccattcagaccaagctgcagtccattctc
gctgccgaaccctccctcaagtacctcgcccagaagccggccaaggacgtgtttgacgtg
aacgccctccccgccgaggagttctctctctccctcggcctcctctcttccccccgcatc
cgcttcacccagagcaagaagggccacaagaatgtgtcctaccagatgcagcagtcactc
gaggacgccgagcacgaggacgacgaagacgaaaccaccgccgagccaaagccaccagcc
accatcaccgccatcgcggcgcccacctgcgggcacggcggaacctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (42)   

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