KEGG   Aeromonas caviae: VI35_06735
Entry
VI35_06735        CDS       T05190                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
acav  Aeromonas caviae
Pathway
acav03030  DNA replication
acav03430  Mismatch repair
acav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VI35_06735
   03430 Mismatch repair
    VI35_06735
   03440 Homologous recombination
    VI35_06735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acav03032]
    VI35_06735
   03400 DNA repair and recombination proteins [BR:acav03400]
    VI35_06735
Enzymes [BR:acav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VI35_06735
DNA replication proteins [BR:acav03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VI35_06735
DNA repair and recombination proteins [BR:acav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VI35_06735
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ATP90049
Position
1396213..1396947
AA seq 244 aa
MSTPQLNRQIILDTETTGMNTAGGPVYLGHRIIEIGCVEVINRKLTGNHFHVYIKPDRLV
DPEAIAVHGITDAFLADKPSFSQIADDFIEFIRGAELIAHNAPFDVSFMDYEFSKLGLNF
KTADICGITDTLAMARDLFPGKRNNLDVLCDRYGIDNSHRTLHGALLDAEILADVYLLMT
GGQTKLNLASETSESETSQDTGIRRLESNRPPLKVVRASDEVAAVHEARLDLVQKKGGAC
LWRQ
NT seq 735 nt   +upstreamnt  +downstreamnt
atgagcacaccccaactgaatcgccagatcattctggataccgaaaccaccggcatgaac
accgcgggcggccctgtctatcttgggcaccgcatcatcgagatcggctgtgtggaggtg
atcaaccgcaaactcaccggcaaccatttccacgtctacatcaagccggatcggctggtg
gatcccgaggccatcgccgtgcacggcatcacggatgccttcctggcggacaagccctct
tttagccagatagcggacgatttcatcgagttcattcgcggcgccgagctcatcgcccac
aacgccccctttgacgtgagcttcatggactatgagttcagcaagctcggtctgaacttc
aaaacggcggatatctgcggcatcacggataccctggcgatggcgcgggatctcttcccg
ggcaagcgcaataacctggacgtgttgtgcgatcgctacggcatcgacaactctcaccgt
accctgcacggcgccttgcttgatgcggagatcttggcggacgtctacctcctgatgacg
ggtggccagaccaagctcaatctggcgagtgaaaccagcgagagcgagaccagccaggat
accggcattcgtcgtctggagagcaatcgcccgccgctcaaggtggtgcgcgcgagcgac
gaggtggcggctgtccatgaagcgaggctggatctggtacagaaaaaaggaggtgcctgc
ctgtggcggcaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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