KEGG   Atta cephalotes (leaf cutting ant): 105624818
Entry
105624818         CDS       T04923                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
acep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105624818
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105624818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105624818
   03041 Spliceosome [BR:acep03041]
    105624818
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105624818
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105624818
Spliceosome [BR:acep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105624818
SSDB
Motif
Pfam: LSM DUF150_C DUF1820
Other DBs
NCBI-GeneID: 105624818
NCBI-ProteinID: XP_012061558
UniProt: A0A158NVK0
Position
Unknown
AA seq 96 aa
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGEIDDEMDARLDLSTIRADPLSSITH
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcgtcaggattagagagttacgtgaatcatacagtttctattatcacgtcggatggt
aggaatttcattggtaccctgaaaggttttgatcaaactatcaatctaattttggatgaa
tcacacgagcgtgtatacagtacgacacagggagtggagcaggttgtcttgggcttgcac
attatcagaggagataacgtagcgatagtaggagagatagacgacgaaatggacgcaaga
ttggatctatcaacaatacgagctgaccccctaagttctattacccattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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