KEGG   Atta cephalotes (leaf cutting ant): 105627573
Entry
105627573         CDS       T04923                                 
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105627573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105627573
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     105627573
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 105627573
NCBI-ProteinID: XP_012064248
UniProt: A0A158P390
Position
Unknown
AA seq 911 aa
MDDSPPHVAPEGEDDFEIQSSAHVTNMKHVELAENWDYEANVSQNNDIEVEKKDEPSIRL
PGYATFEDYIQDAFDAMRAGIKAANNLPAGDNFNYYACFPSFNDARQKDKERILDTMQSI
IKLAGGSSNIQNRDIDEKFDLLLEANDQLLDQANILMDEESGILRNPQVELVVSQMPKPV
VNGTWNIKTNTNQISDNLEKVRLLGGKNIQRPQLMFKDKIDNSSKPWMPRIKDKPNSLKP
LALHVEEDEHGEVFNHPYEFELDKFETPECQLKKRIPVEYKSLDDTNFVFIDKPADINIL
LKDLRNHKEIAVDLEHHSYRTFQGITCLMQISTIQTDYLIDTLSLRSELYQLNEIFTKPS
ILKVFHGADMDILWLQRDLSLYVVNMFDTHQAAKQLNLPYLSLAYLLNKYCEIDPNKHFQ
LADWRIRPLPVELMKYAREDTHYLLYVKDMLKNELIDAANGKSNILKAVYDQSTEICKRT
YVKPIWTEESCMNMYRKSQKSFNNKQMYALMELHRWRDFTARQEDDSIGYILPNHMLLNI
AETLPREMQGILACCNPIPPLVRQNLLKIHKIILKAREQPLVKSIAEQDIRQRPTQQNHM
DTGASLYIPHDVPSGTEARADLPCLLNKNIVRSELSEANKCQTTKHTITIFDSSDLSEDE
ETKDSKNGNKKKIIFISPFMRYRCVIPMVMDQEAKEREKEQQKKEETEKKKXTLKSQNEC
INEAEINESKNRVYEHFKQMSQKNIQAEVQLKKKKKSDNIFLNLTRRQRKRKFDTGNESQ
RKNDANDFSTSTSHLNSETIHVSKKAKQKTLKVIEEQKLQESLAQVQSDNRNSVTIKSIR
ARKKGDKKANEEMLRKQGLLPSTKFDYKSVDFSSFQGGSTQSSANRTQFQQPRQKKKEKH
FQKWKKQKLNI
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggacgactctccacctcatgttgctccagaaggagaggatgatttcgaaatacaatcg
agtgcgcacgtgacaaatatgaagcatgtggaacttgctgaaaattgggattatgaggcg
aacgtctcgcaaaacaatgacatagaagtcgaaaagaaagatgagccatcgatccgcctt
cctggatatgcaactttcgaagattatattcaagatgcgtttgatgcgatgagagctgga
atcaaagcagctaataatctgcctgccggagacaatttcaattattacgcttgctttcca
agctttaatgatgctagacagaaagataaggaaagaatactggatacaatgcaaagcata
ataaaattagcaggaggttctagtaatattcaaaaccgagacatcgatgaaaagtttgat
cttttattggaagcgaatgatcaactactagatcaagcaaatatattgatggatgaagaa
agcggtattctacgaaatcctcaggtagaattggttgtatcacagatgccaaaaccagtt
gtgaatggcacttggaatataaagactaataccaatcaaatctcagataatttagagaaa
gtacgattgttgggtggaaaaaatatacaaagaccacagttgatgtttaaggataaaatt
gataatagttcaaagccatggatgcctcgaattaaggataaaccaaactccctgaagcca
ttggctcttcatgtcgaagaagacgaacatggtgaagtctttaatcacccttatgaattt
gaactagataaatttgaaacaccagaatgtcagctgaaaaagagaatacctgttgaatat
aagtcattggatgatactaattttgtattcattgataaaccagctgatatcaacattctc
ctaaaagatctgagaaatcataaggaaatagctgtggacttggaacatcactcttataga
acgtttcagggcataacttgcttaatgcaaatatcaacgatacaaaccgattacttaatt
gatactttgagcctacgatcagaattatatcaactaaatgaaatttttacaaaaccttca
atcttgaaagtctttcatggtgctgatatggatattttgtggctccaaagggatttgtcg
ctgtatgtagtgaacatgtttgacacccatcaagctgcaaaacagctcaacctaccctat
ctcagtttggcttacttattaaacaaatattgtgagatagatcccaacaaacattttcaa
ttagccgactggcgtatacggcctttaccagtagaactaatgaaatatgcgagagaagat
acacattatttgctttatgtaaaagacatgctgaaaaacgaattgattgatgcggctaat
ggcaaaagcaatatcttgaaggctgtgtatgatcaaagcactgaaatttgtaagcgtacg
tatgtgaaaccaatttggacagaggaaagttgtatgaacatgtacagaaagagtcaaaaa
tctttcaacaataaacagatgtatgcgcttatggaattgcacagatggcgagatttcacg
gcaaggcaggaggatgatagtatcggttatatattaccaaaccatatgctactcaatata
gctgagacgctgcctcgtgaaatgcagggtattctagcatgttgtaatccgattccgcca
ttagtacgacaaaacttactgaaaatacacaagataatactgaaggctagggaacaaccg
cttgtaaaatctattgctgaacaggacattcgacagagaccgacacaacaaaatcatatg
gatactggagcttccttatacataccgcatgatgtaccaagcggtacagaagcaagagca
gatttgccatgtcttttaaacaagaatattgtcagatcagaactatcagaggcaaacaag
tgtcagaccaccaagcatactataacgatattcgattcatcagatttatcagaggacgaa
gaaacaaaagatagtaagaatggaaataaaaaaaagattatattcataagtccgtttatg
agatacagatgtgtcataccaatggtaatggatcaggaagcaaaagaacgagaaaaggaa
caacaaaagaaagaagaaacagaaaagaagaaanaaacattgaaaagtcagaatgaatgt
ataaacgaggctgagattaacgagagtaaaaacagagtttatgaacattttaaacaaatg
tctcaaaagaatatacaagcggaggttcaactcaaaaagaaaaagaaatctgataatata
tttctcaatctaacacgtagacaaagaaagagaaaatttgatactggaaatgagagtcaa
agaaagaacgacgccaatgatttttctacatcgacatcgcatttaaatagtgaaactata
catgtgtccaagaaagcaaaacaaaaaacactgaaagtaatcgaagaacagaaattgcaa
gagagtcttgcacaagtacaaagtgataatagaaattctgtaacaattaaatcgataaga
gctaggaaaaaaggtgacaaaaaagcgaatgaggaaatgttgaggaaacagggtttgtta
ccatcaacaaaattcgattacaaatcagtagactttagcagtttccaaggtggcagtaca
caaagtagtgcaaatcggactcagtttcagcaacctcgacaaaagaagaaggagaaacac
tttcagaagtggaagaagcaaaaacttaatatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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