KEGG   Acinetobacter baylyi: ACIAD3179
Entry
ACIAD3179         CDS       T00185                                 
Symbol
rnr
Name
(GenBank) exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
aci  Acinetobacter baylyi
Pathway
aci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACIAD3179 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aci03019]
    ACIAD3179 (rnr)
   03016 Transfer RNA biogenesis [BR:aci03016]
    ACIAD3179 (rnr)
Enzymes [BR:aci01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     ACIAD3179 (rnr)
Messenger RNA biogenesis [BR:aci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACIAD3179 (rnr)
Transfer RNA biogenesis [BR:aci03016]
 Prokaryotic type
  tRNA degradation factors
   ACIAD3179 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2 OB_RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: CAG69866
UniProt: Q6F7U9
Position
3107961..3110414
AA seq 817 aa
MLNLSSIMKPNEIMKNWIDPEAKAEAERYDNPIPSRTLILTTLEQLDLPQSHAELVDHFD
IHDQKSIDALSHRLIAMVRDGQLSKDGFKFQPIGEQPTFDATVYINNKGFGSAHIDGQND
LLLPERELRLVFNGDRVKVRQTSVDRKGKAWGFITEVTQHRVKQLIGKLAVHEGEYFLQP
SAPNAHQPIPLEKELIEHAQAKVGENLRVAIDDYPTREEFSTGHIIQSMSDKADTEIIIP
QTILEFGLPYEFPEEVVKDAESFKEPSKKDIEGRIDLRDLPLVTIDGEDARDFDDAVYAE
KRSGGGYRVVVAIADVSHYVRLGKPLDDEAQERGTSVYFPHFVLPMLPEALSNGLCSLNP
HVDRLCMVCDLKLSRAGRVMSYEFYPSVMHSKARLTYTQVGNYFDGQTDAIPDDKNIQKS
LNTLFQLYQTLKGLRAKRHAMEFETIETYMTFDELGGIKEILPRTRNEAHKLIEECMLLA
NVAAAEFSLQHDIPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQRVIEATKD
RIDAPSIHAVLLRSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLQQ
KPYPLSGAALDDAGEQFSRTERRADEASRSVTTWLKCHYMKQHLGEEFIGIISAVTEFGL
FVTLKDLYVDGMIHVSQLGDDFFLYDQASQSLVGQNRGQIFGLGDEVKIKVAAVNLDERK
IDFELMQQITHAGRVIRQKAPRSSKTQATEQVFNVPSETTSTQERDTRKKEKSKSKPSSY
AKKSAKKSSPASVSKPVKEKKKVKVKKKKSNAKPKSE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgctaaacttatcttctattatgaagccaaatgaaattatgaaaaactggatcgatcct
gaagcaaaagcggaagctgaacgttacgataatcctattcctagccgaactcttattctt
actacattagaacaacttgatctgccacagtcgcatgccgagctggtcgatcactttgat
attcatgatcaaaaaagtatagatgctttaagccatcgcctgattgccatggtacgcgat
gggcaactgtctaaagatggttttaaatttcagccgattggtgaacaacctacatttgat
gcaacggtatatatcaataataaaggtttcggttctgcacatattgatgggcaaaatgat
ttgctcctgccagaacgtgaattacgcctagtctttaatggtgatcgtgttaaagttcgt
caaacctcagtcgatcgtaaaggtaaagcttggggctttattacagaagtaacgcaacac
cgcgttaagcagttgattggtaaactggctgtgcacgaaggtgaatatttcttgcagcca
agcgcgcccaatgcacatcagcccattcctcttgaaaaagaacttattgaacatgctcag
gccaaggtaggtgagaatttacgtgttgcgattgatgattatccaacacgtgaagaattc
tcgacaggtcatattattcagtcgatgtctgataaagccgatacggaaattattattcca
caaaccattctggaatttggcttaccttatgaatttccagaagaagtggtgaaagatgcc
gaaagctttaaagaaccatcgaaaaaggatattgaaggacgtatcgacttacgtgatttg
cctttggtcaccattgatggtgaagatgcacgtgactttgatgatgctgtttatgccgaa
aaacgttcaggtggcggttatcgtgttgtggttgcaattgcagatgtcagtcattatgta
cgtcttggtaagcctttggatgatgaggcccaagaacgcggtacatccgtttatttcccg
cattttgtcttgcctatgctaccagaagcattatccaatggcttatgttctttaaatccg
catgttgatcgcttatgtatggtgtgtgatctcaagctgtcacgtgctggacgggttatg
agctacgagttctacccttctgtgatgcattcaaaagcacgcctgacctatacacaggtc
ggtaactattttgatggacaaacagatgccattccagatgataaaaatattcaaaagtct
ttaaatacgctattccaactctatcaaacactcaaaggtttacgtgccaaacgtcatgcg
atggagttcgaaaccatcgaaacctatatgacgtttgatgaattaggtggtatcaaggaa
attctgccacgtacgcgtaatgaagcgcataaactgattgaagaatgcatgctgcttgcc
aatgttgcagcggcagaattttccctccagcatgatattccaatgctgtatcgcgtgcat
gaagcaccagagttttcacggattcaaaaagtgaaggactttgtcaaactactgggttta
cctttcccagatcagccgactcaggcagattatcagcgcgtgattgaagcgaccaaagac
cgtattgatgcaccaagtatccatgcagtgttattgcgctcaatgatgcaagcttactac
ggcgccaaaaatgcaggacattatggtttagcatacgaggcttatacccacttcacctca
ccaatccgccgttatccagatttgttactacatcgtgcaatcaaagctcatcttcaacaa
aaaccatatccactttctggtgcagcactagatgatgcaggtgaacaattttcccgtacc
gaacgtcgtgccgatgaagcatcacgtagtgtgaccacttggttaaaatgccattatatg
aaacagcatcttggcgaagagtttattggaatcatcagtgctgttaccgaatttggcttg
tttgttacgcttaaagatttatatgtagatggcatgattcatgtcagtcagttaggtgat
gatttcttcctctatgaccaagccagtcagagcctggtcggtcagaatcgtggccagatt
tttggcttgggtgatgaagttaaaatcaaggttgcagctgttaatctagatgagcgtaaa
attgatttcgaactgatgcagcagattacacatgcggggcgtgtcattcgccagaaagca
ccgcgtagctctaagactcaagcaacagagcaagtctttaatgtgccaagtgaaaccacc
tctacgcaagaacgtgacacacgcaaaaaagaaaagtcaaagagcaagccaagttcttat
gctaaaaaatcggcaaaaaaatcttctcctgcatcggtcagtaagcccgtaaaagagaag
aaaaaagtcaaagttaagaagaaaaaatcaaatgccaaacctaaaagtgaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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