KEGG   Actinoalloteichus sp. GBA129-24: UA75_08210
Entry
UA75_08210        CDS       T04619                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
acti  Actinoalloteichus sp. GBA129-24
Pathway
acti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UA75_08210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acti03019]
    UA75_08210
   03400 DNA repair and recombination proteins [BR:acti03400]
    UA75_08210
Enzymes [BR:acti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UA75_08210
Messenger RNA biogenesis [BR:acti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     UA75_08210
DNA repair and recombination proteins [BR:acti03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      UA75_08210
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind Pribosyltran HEM4 B12-binding
Other DBs
NCBI-ProteinID: APU19658
UniProt: A0A1L7F4E6
Position
complement(1824765..1826915)
AA seq 716 aa
MEGPAALCGMPDTVDEQGLRELAEERLRALAGPQARLREDQWAAISALVVDRRRALVVQR
TGWGKSAVYFVATALLRELGEGPTIIVSPLLALMRNQVEAAARAGVHAATINSANVTEWE
AVQDSVAAGEVDVLLVSPERLNNPDFRDTVLPALTESAGLLVVDEAHCVSDWGHDFRPDY
RRLRTLLTELPEGVPVLATTATANDRVVHDVTEQLGLGQAEAQTLVLRGPLDRESLHLGV
LRLPTAEARLAWLAENLPRLTGSGIVYTLTVATAGEVAAYLRERGHEVVAYTGRTEPAER
EQIEADLLANRVKAVIATSALGMGFDKSDLGFVLHLGAPASPISYYQQIGRAGRGVARAD
VLLLPGREDAEIWRYFASLAFPPEAVVTQVLAVLNASDRPLSTSALEPRVELSRNRLEVV
LKVLDVDGAVRRVRGGWEGTGETWTYDATRYQRIEQARQSEQHAMLAYLDSTGCRMEFLR
TQLDDPAAASCGRCDNCTGRRWSDEVSAAEQAAAGERLRRPGVEIGTRRQWPTGMASLGI
EATGRIDAGESAAEGRALGRLTDIGWGGRLRELLAPDARDDQPVPADVVTACVSVLAAWD
WARRPVGIVAVGSRTRTRLIRSLAERIGALGRLPVLGEIAVVGEAPRRANSAQRVAGLWE
SFAVREPLVSRLAEIDGPVLLIDDRVDTGWTMTITARLLRQAGVPAVLPFALAVTS
NT seq 2151 nt   +upstreamnt  +downstreamnt
gtggagggcccggccgcgctctgcggtatgcctgacaccgtggacgagcagggtttgcga
gaactggccgaggagcggttgcgcgcgttggcgggcccgcaggcacgtttgcgagaagac
cagtgggccgcgatcagtgccctggtggtggaccgccgacgggcgctcgtcgtgcaacgg
accggctggggcaagtcggccgtctacttcgtggcgacggcgctgctccgtgaactgggc
gaaggccccacgatcatcgtctcgccactgctggcgctgatgcgcaaccaggtggaggcg
gcggcccgtgcgggcgtgcacgcggcgacgatcaactcggccaacgtcaccgagtgggag
gcggtgcaggactcggtggccgcaggcgaggtcgacgtgctgctggtcagcccggaacgg
ctgaacaaccccgacttccgagacaccgtgctgcccgccctgaccgagagcgccgggctg
ctggtggtcgacgaggcccactgcgtctccgactggggacacgacttccgacccgactac
cgcaggctgcgaaccctgctcacggaactcccggagggggttccggtgctggccacgacg
gcgacggccaacgaccgggtcgttcacgacgtcaccgagcagctcggactcgggcaggcc
gaggcgcagaccctggtgctgcgcggaccgctggaccgcgagagcctgcacctcggggtg
ctgcggctgccgaccgccgaggcccggctcgcctggctcgccgagaacctgccgcggctc
accggctcgggcatcgtctacacgctgaccgtcgccaccgcgggcgaagtggccgcctac
ctacgggaacgcgggcacgaggtcgtcgcctacaccggtcgcaccgaaccggcggagcgg
gagcagatcgaggcggacctgctggccaaccgggtcaaggcggtgatcgccacctccgcg
ctgggcatgggcttcgacaagtccgatctcgggttcgtcctgcacctgggcgcgcccgcc
tcccccatctcctactaccagcagatcggtcgggccgggcgtggcgtggcccgcgcggac
gtgctgttgctgccgggtcgggaggacgccgagatctggcggtacttcgcctccctggcc
ttccccccggaggcggtcgtcacacaggtgctcgccgtgctgaacgcctcggaccgaccg
ttgtcgacctcggcgctggagcccagggtcgaactgtccaggaatcggctggaggtcgtg
ctcaaggtcctcgacgtcgacggcgcggtgcgtcgggtgcgcggcggctgggagggcacc
ggggagacgtggacctacgacgccacgcggtatcagcggatcgagcaggccaggcagtcc
gagcagcacgccatgctcgcctacctcgactcgaccggctgccggatggagttcctccgc
acccagctcgacgacccggctgcggcgtcctgcgggcggtgcgacaactgcaccggccga
cgctggtccgacgaggtgtccgccgccgagcaggccgcggccggtgagcgactgcgcagg
cccggtgtggagatcggcacgcgcagacagtggcccaccggaatggcgtcattgggaatc
gaggcgaccggccggatcgacgcgggcgagtcggcggcggagggaagagcgctgggcagg
ctcaccgacatcgggtggggcggcaggctgcgcgagctgctggcccccgacgcccgtgac
gatcaaccggtgcctgcggacgtcgtcacggcctgtgtctcggtgctggcggcctgggac
tgggcacggcgcccggtcggaatcgtcgccgtgggctcccggacgcggacccgactgatc
cgcagcctcgccgagcgcatcggtgcgctgggcaggcttcccgtcctcggcgagatcgcc
gtggtcggtgaggcgccgcgccgagcgaacagtgcgcagcgggtcgccgggctgtgggag
tccttcgccgtgcgggagccgctggtgagcagactcgccgagatcgacggaccggtgctg
ctgatcgacgaccgggtggacaccggctggaccatgacgatcaccgcgaggctgctccgc
caggcgggcgtgccggccgtcctgcccttcgccctcgccgtcaccagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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