KEGG   Acidithiobacillus caldus SM-1: Atc_1302
Entry
Atc_1302          CDS       T01581                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
acu  Acidithiobacillus caldus SM-1
Pathway
acu03030  DNA replication
acu03430  Mismatch repair
acu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Atc_1302
   03430 Mismatch repair
    Atc_1302
   03440 Homologous recombination
    Atc_1302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acu03032]
    Atc_1302
   03400 DNA repair and recombination proteins [BR:acu03400]
    Atc_1302
Enzymes [BR:acu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Atc_1302
DNA replication proteins [BR:acu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Atc_1302
DNA repair and recombination proteins [BR:acu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Atc_1302
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 AAA_18 AAA_30 AAA_14 AAA_2 AAA_16 AAA_19 TsaE nSTAND3 AAA_7 AAA_assoc_2 AAA_28 PIF1 Mg_chelatase AAA_24 SKI ABC_tran NTPase_1
Other DBs
NCBI-ProteinID: AEK57951
UniProt: F9ZNX0
Position
1318915..1320633
AA seq 572 aa
MAGWRRHPFPPVTVRPYLALARRWRPQRFEDFVGQEAVVAALRHGLDSGRVHHAFLFTGT
RGVGKTTLARLLAKSLNCEEGVSSRPCGECSACRSIANGNFVDLLEVDAASRTRVDETRE
LLDNVQYAPTVGRYKVYLIDEVHMLSSHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTI
LSRCLQLQLRRLEPARIRERLRTIVDAEGIAAEDTALELLSHAADGSLRDALSLLDQAIV
HGAGTVAAQAVRDMLGVAPEAVVWSLVTGLLRDDGPTVLRLVQEHMDLGQDPAGLLDAVI
EALHRLSLARYVEDVRRALPPPWDGGALPDALSLQAFHAILLSARRDFYLYPDGRMALEM
AVLRVLAFREEDGDGGQPGAPKALAQEPSAAAEELGRSASVSPRSGTQPTRDAGPISGRQ
PSEQAAPPPAMAENAAARWAEILPQLALSPMLRASFGHTRATRCDVELVELWAEAGHLEF
LRAEMDTLAVALESFWGRRPQLRLDLLAGEDAVDTVVGARERAAAADRQRLHERVHQDPE
VREYLETFGAKVVAIRRIGDADAGPSEAFGAS
NT seq 1719 nt   +upstreamnt  +downstreamnt
gtggctggttggcgtcgccacccatttccgcccgtgacggttcgtccctacctggctctg
gctcggcgctggcgcccgcaacgtttcgaagatttcgtcgggcaagaagccgttgtcgcg
gccttgcggcatggcctggactcggggcgcgtgcaccacgcctttcttttcaccggtacc
cgcggcgtgggcaagaccacgctcgcccgcctgcttgccaaatccctcaactgcgaagag
ggtgtcagcagtaggccctgtggcgagtgcagcgcctgccgtagcatagccaacggtaat
ttcgtggatttactcgaggtggatgccgccagccgcacgcgcgtcgacgaaacccgggag
ctgctggacaacgtccagtacgcaccgacggtgggccgctacaaggtctacctcatcgac
gaggtgcacatgctctccagtcacagcttcaatgctttgctgaagactttggaagagccg
ccggagcacgtcaaattcctgttggcgaccaccgatccgcaaaaacttcccgtcaccatt
ctgtcccgctgtctgcaactccagttgcggcggctggaacctgcccgcatacgcgagcgt
ttgcgcacgattgtcgacgccgaggggattgcggcggaggacacggctctggagctgctt
tcccatgccgccgacggcagtttgcgcgatgccctcagccttctcgatcaggccatcgtg
catggcgccggcacggtggccgcccaggcggtccgagacatgctgggagtggcgccagag
gcggtcgtctggagtctggtgacgggattgttgcgcgacgatgggccgaccgtgcttcgc
ctcgtgcaagaacacatggatctgggacaggatcccgcggggcttttggatgcggtcatc
gaagcgctgcatcgactgagccttgcccgctatgtggaggacgtgcggcgcgccttgccg
ccgccctgggatgggggtgcgttacccgatgccctgagtctgcaggcgtttcacgcgata
ctgttatcggcacggagagatttctatctgtatccggatggccgtatggctctggagatg
gccgtcctgcgggtgctggccttccgcgaggaggacggggatggcggccaacccggggcc
cccaaagcgctcgcccaagaaccttcggcggcggcagaggagcttgggcgaagcgcatcc
gtatcgcctcgttccggtacgcagcccacgcgggacgcggggcccatatccgggcgacaa
ccgtcggagcaggcggcacctccgccagcgatggccgaaaatgcggcagcacgctgggca
gagatcttgcctcaactagcgctcagccctatgctccgggcgtcctttggccatacgcgg
gcgacgcgttgcgatgtcgagctcgtggagctctgggccgaggccggtcacctggaattc
ttgcgtgccgagatggatacgctcgccgtcgcgctggagagtttctgggggcggcgcccg
cagttgcgcctggacctgctggccggtgaggacgcggtggataccgtagtgggtgcccgg
gaacgcgcagcagcggcggatcggcaacgtctgcacgaacgggtgcatcaggatccagag
gtgcgggaatatctggagactttcggcgcgaaggtggtggccattcgcaggataggggac
gccgacgcgggtccgtcggaggcgttcggggcatcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (36)   

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