KEGG   Acinetobacter sp. DUT-2: A0J50_14250
Entry
A0J50_14250       CDS       T04353                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acw  Acinetobacter sp. DUT-2
Pathway
acw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0J50_14250 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acw03021]
    A0J50_14250 (rho)
   03019 Messenger RNA biogenesis [BR:acw03019]
    A0J50_14250 (rho)
Transcription machinery [BR:acw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     A0J50_14250 (rho)
Messenger RNA biogenesis [BR:acw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A0J50_14250 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT Sulfotransfer_1 AAA_22 AAA_25 OB_RNB AAA Spore_III_AA GpA_ATPase
Other DBs
NCBI-ProteinID: AMO41677
Position
3032722..3033990
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDKLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatttaactgaactcaagaaaaaaccaatcggcgaactaattaaaattgctgaattt
atgggcctggaaggtatggctcgtaacagaaagcaagatattatttttgccattttgaaa
cgccatgcgatgaatggcgaagaaatttttggtgatggcgttctcgaaattctctctgat
ggttttggttttttgcgttctgccgcaggttcgtatttagcaggtccggatgatatttat
gtgagtccttcacagatccgacgctttaacttgcgtacaggtgataccatcacaggtact
attcgccctccaaaagaaggtgagcgttattttgcgttgctcaaagttaaccagattaac
tatgacacgccagaaaattctcgaaataaaattttatttgaaaacttaactccccttttc
cctaccgaacaattggttatggaattaggtaatggtacgacagaagacttaactgctcgt
gtcgttgatttagttgcgccaattggtaaaggccaacgttctattattgttgcaccgccg
aaagcgggtaaaacaatgttacttcaaaatattgctcaatcgattgttagaaacaatcca
gaagtattcttgattgttctattaattgacgaacgtccagaagaagtaaccgaaatggag
cgtactgttcgcggtgaagttattgcgtcaacatttgatgaagcaccagctcgccatgta
caagttgcagaaatggtaattgaaaaagctaaacgtcttgttgagcacaaaaaagatgtt
gtgattcttcttgactctattacccgccttgcacgtgcttacaacactgttattccgtca
tcaggcaaagtattaactggtggtgtagacgctcatgcattagagcgccctaagcgtttc
ttcggtgcagcacgtaatatcgaagaaggtggctcacttacgatcatctctactgctttg
attgaaacaggcagtaaaatggatgatgtaatttatgaagaattcaaaggtacaggtaac
caagagatcactcttgatcgccgtattgctgaaaaacgtgtcttccctgctatgaatatc
aaaaaatctggcacacgtcgtgaagagcgtttaatggatgaagataaattacgcaaagta
tggatcctccgtaagctacttcaccctatggatgagttggcagcaatggaattcttactt
gaccgcatgaaagaaaccaaaacaaatgatgatttctttgatcaaatgaaacgtaaagct
tcaacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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