KEGG   Anaeromyxobacter dehalogenans 2CP-C: Adeh_0838
Entry
Adeh_0838         CDS       T00326                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ade  Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ade00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Adeh_0838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ade03019]
    Adeh_0838
   03400 DNA repair and recombination proteins [BR:ade03400]
    Adeh_0838
Enzymes [BR:ade01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Adeh_0838
Messenger RNA biogenesis [BR:ade03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Adeh_0838
DNA repair and recombination proteins [BR:ade03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Adeh_0838
SSDB
Motif
Pfam: Helicase_C DEAD HRDC RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: ABC80613
UniProt: Q2IP82
Position
977323..978906
AA seq 527 aa
MAIALARAPAAAPPAPGAARALLQEVFGHAAFRPGQQEIVDAVVAGRDCIGVMPTGAGKS
LTYQIPARLLGGTTLVVSPLIALMKDQVDAMARVGLRAAFLNSTLSPEERRERVRALRRG
DLELLYAAPEGLEASVGDALEGTALSLIAVDEAHCISHWGHDFRPAYRNLAGLKARFRAP
VLALTATATREVVRDIAGQLGMADPLVIRGSFLRRNLRISAVKKGEGVRTRDALLRLVRA
RRGQSGIVYALSRRSVEETAELLRDHGVRAGAYHAGLDPDVRARVQDEFQSGALEVVVAT
VAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMSWDRLLD
DAEPEVAEVQRRMARSMFRLADEEGCRHERLVGWFGERIDPCGDACDRCTGEDVLASAPA
VPRGARERRGGERGRRDGGGRGRARAEPVEAAEADVELFEALRAWRAAEAKERGVPAYVV
FSDATLAEIALQRPAGEDALLDVKGVGPRKLEEFGAALLALVRAHRS
NT seq 1584 nt   +upstreamnt  +downstreamnt
gtggcgatcgcgctggcccgcgccccggcggccgcgccgcccgcgcccggggcggcgcgc
gcgctgctgcaggaggtgttcggccacgccgcgttccgcccgggccagcaggagatcgtg
gacgcggtggtggccgggcgcgactgcatcggcgtcatgcccaccggcgccggcaagtcg
ctcacgtaccagatcccggcgcggctgctgggcgggaccacgctcgtcgtctcgccgctc
atcgcgctcatgaaggaccaggtggacgcgatggcgcgggtgggcctgcgcgccgcgttc
ctcaactcgacgctctcgccggaggagcggcgcgagcgggtccgggcgctccggcgcggc
gacctggagctgctgtacgccgcgcccgaggggctggaggcgtcggtcggggacgcgctg
gagggcaccgcgctctcgctcatcgcggtggacgaggcgcactgcatcagccactggggt
cacgacttccgccccgcctaccgcaacctggccggtctgaaggcccgcttccgcgcgccg
gtgctggcgctcaccgccaccgccacgcgcgaggtggtgcgcgacatcgccggccagctc
ggcatggccgatccgctggtgatccgcggctcgttcctgcgccgcaacctgcgcatctcg
gcggtgaagaagggcgagggcgtgcgcacccgcgacgcgctgctgcgcctggtgcgcgcg
cgccgcgggcagagcgggatcgtgtacgcgctctcgcggcgctcggtggaggagaccgcc
gagctgctccgcgaccacggcgtgcgcgccggcgcgtaccacgccggcctcgacccggac
gtgcgcgcgcgggtgcaggacgagttccagtccggcgcgctcgaggtggtggtggccacc
gtggcgttcggcatggggatcgacaagccggacatccgcttcgtcatccaccgggacctg
ccgcgctcggtcgaggcctactaccaggagatcggccgcgccggccgcgacggcgcgcag
agcgactgcgtgctcttctactcgtgggccgacgtgatgagctgggaccggctcctcgac
gacgccgagccggaggtcgccgaggtgcagcggcgcatggcgcgctccatgttccggctg
gccgacgaggagggctgccggcacgagcggctggtgggctggttcggggagcgcatcgac
ccctgcggcgacgcctgcgaccggtgcaccggcgaggacgtgctcgcctcggcgccggcg
gtgccgcgcggcgcccgggagcggcgcggcggcgagcgcgggcgccgcgacggcggggga
cgcgggcgggcgcgcgccgagccggtcgaggccgccgaggcggacgtggagctgttcgag
gcgctccgcgcctggcgggcggcggaggcgaaggagcgcggcgtccccgcctacgtggtg
ttctccgacgcgacgctggcggagatcgcgctccagcgcccggccggcgaggacgcgctc
ctcgacgtgaagggcgtggggccgcgcaagctggaggagttcggcgccgcgctgctcgcg
ctggtgcgcgcccaccgctcatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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