KEGG   Acropora digitifera (stony coral): 107347502
Entry
107347502         CDS       T04352                                 
Name
(RefSeq) collagen alpha-4(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf04512  ECM-receptor interaction
adf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:adf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107347502
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107347502
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:adf04147]
    107347502
   00536 Glycosaminoglycan binding proteins [BR:adf00536]
    107347502
Exosome [BR:adf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107347502
Glycosaminoglycan binding proteins [BR:adf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107347502
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107347502
SSDB
Motif
Pfam: VWA VWA_2 VWA_3 WAP
Other DBs
NCBI-GeneID: 107347502
NCBI-ProteinID: XP_015768940
Position
Un
AA seq 1504 aa
MKMVLSGGDRNFSPMSLLTVSFLIMAVLAPKIVQSVGCPEFPKQLSLNCAPHSSLDQCKF
DGDCTESKDHMCCLIGCQKMCLDPALIQLSIGGSVVCPVLPRPSSCPDQPNECSVESECS
VGQKCCSDGCRMVCADPVAKPTTQPPSIDPWKSCNTSVDLAFIIDSSGSISRRNYVKVKN
FVKYVARGFGISPSESRAGIVLYSTDASIKAQFDQYTSNEDFVKAVDGLPHRRQLTYIDR
ALRLAASQLFPSARKDVPKIALLMTDGKQTDPRGVVNLREASAPLRKQGVRVLAFGVGKN
VNVRELRLTVERDEDVISVSNFDDLISKVRTYTANLCAAAETEPIYPDADIAFLVDSSSG
VSFQQFEMEKRFVKSMARDFVVSPLGPRAALVSYSATSNTVIGFSGYSSNVDFSRQINNA
RFMGGKRKIDQALIHTASLFRKTGRVGLRIVILLTAGNYYTGPGSRSMSSVMSLMNSLDA
HVYVIGIGPFFTKSLFTPMVRGPGDIFWIPSFNDLAPRQSRIARYLRLSANAFTYERAHW
SADVIFLMDSSKYVTGDNYILEKNFVKLMARLLNLASNRSRAALLTFSDNAQLVINFDGY
EDRAAFDAAVNTAPHQKGDRLIDNAFDSATGILRTDSRATVPKYVILLTTGKPTLRSNSR
SLVNASSNVWSNGGKVFVVAVLTGGYTISEFYPAVQRPEDAFSVSSFDALLSEAPTIAAR
MMASWRAPVSKTFSADIAFIVDSSSSVSPFQYSRVKQFVGILSEYLNVEPGRSRGAFVTF
GEAPVEVFNFDSYKLLSEYKTKVNEAPYLGSERTISSALSAAGILFSNARGAHPWIAILV
TSWRPYEIHGARSLEILARPLLSRGVWLYVLSIGENPYVGWLTPMLVEPRDAFSIISYRD
LPGNIGPVGRHIVNDNFLFGHASFQVDIIFLMDSSLGVNSQNYEIEKRFVQRIAMHLGVF
TGRSRAALVAYGGNSWVVFGFGGYHSNADFELRLNEALMFGGVRRVDRALDTAAALMLGA
RPTVPKAVMLIMTGDPSWEADAMPITDSARPLRDLGAWLYVVAVGQTDPSELQKATIRPT
DIYFAMSFSSLYGYISPVAKYIANTSVITGISQLNADIVFIVDCSSDVPYREYSTQKTFV
RSLTQYLNIQPDRSRAALIVYGSRALTAVRLERSGTFGSELTKAPFLAGRRRFDSALSAA
STVFENARENVPKIMMLFMAGKQAQVRGATSLKDAIEPLRQEGVTTFIFRIGLEPDLKEL
VPVVDSPENIFTFARFADMDARVPYVARQIPFNSALLGSITFAIEIVYILDSSDTVTLDQ
YKDEKTFVLYLARYLKMVPSHSRNAVISYGSSAIVVTDLGQADTIQAFDLAVNNASKIGG
QRRMDLAIDTARTVLSNARAAIPKVVILLTTGSQPTGIKAGVLESSMQRLYEMGARLYAV
SINAPTVNLPLKNTDGSDWFPVRSFMDLPIFCFLASCIYPILVEPDLLWNVMANGPTVVQ
IKYL
NT seq 4515 nt   +upstreamnt  +downstreamnt
atgaaaatggttttatctggaggagacaggaatttctctccaatgtcattgctgacagtg
tccttcttgattatggctgttcttgcaccgaagatcgtgcagagtgttggatgtccggag
tttcctaaacagctgtcgctgaactgtgccccgcattccagtttggatcagtgtaaattt
gatggggactgcactgagtccaaagatcacatgtgctgtttgattggctgtcaaaagatg
tgcttggatccagcactcatccagttgtccattgggggatcagttgtgtgtcctgtatta
ccaagaccttcatcatgcccagaccaaccaaatgagtgtagtgttgagagtgagtgcagt
gttggccagaagtgctgttctgatggatgtaggatggtttgtgctgatcctgtcgctaag
ccaacaacacagccaccaagtatagatccttggaaaagctgcaatacaagtgtggacctg
gcctttataatagattcatcaggaagcatttcaagaaggaattacgtgaaagtaaaaaac
ttcgttaagtacgttgcgagaggcttcgggatttcaccttcggaaagccgagctggcatc
gttttgtacagcactgatgcttctatcaaagctcagtttgaccagtacacaagcaatgag
gattttgttaaagctgtcgatggccttcctcatagaagacaattaacgtatatagaccgc
gccctcagattggctgcttcgcagctttttccaagcgcgcgaaaggacgtgccaaagatt
gcattgctaatgacagacggcaaacaaacggatcctagaggagtggttaatcttagagaa
gcttctgcgcctcttcgaaagcagggagtccgtgtgcttgcctttggtgttggaaagaac
gtgaacgtgagagaactgagactgactgtggaacgagatgaagacgtcatatctgtgtca
aactttgatgatttgataagcaaagttaggacttacactgcaaatctttgtgcagctgct
gaaacggagcccatttatcctgatgcggatattgccttcctcgtggattcttcgtctggt
gtatcttttcaacaatttgaaatggagaaacggttcgtaaaaagtatggcccgagacttc
gtcgtctctccgcttggccctcgggctgcactcgtcagttactcggcgacgtctaacacc
gtcatcggcttttctggttacagcagcaacgtcgactttagtcgtcaaatcaacaatgct
cggttcatgggaggaaagcgaaaaattgaccaggccttaattcacactgcttcattgttt
cgaaaaactggacgtgttggcttgcggattgtcatcttattaactgccgggaattattac
acaggaccagggtcgaggtccatgtcgtctgtcatgtcattgatgaatagcctcgatgcc
catgtttacgtaattggcattggccctttttttacgaaatccctgttcactcccatggtt
cgtgggcctggtgatatattttggataccttcattcaacgatctggcacctcggcaatcg
cggatcgctagatatctaagactgtctgccaacgcttttacatacgaacgcgctcattgg
agcgccgacgtgatatttctgatggattcttcaaaatacgtcacaggcgacaattacatc
ttagagaagaactttgtgaagctaatggcgcggcttttgaacctcgccagcaacagaagc
cgcgcggcgcttttgacctttagcgacaatgcacaactagttatcaacttcgatggctac
gaagaccgtgcagcttttgacgctgccgtcaacacggcgcctcatcagaaaggggatcgt
ttaattgataacgcatttgactctgcgactggaatactgcggacagattctcgagcaact
gtaccaaagtacgtcatccttttgacaactgggaaaccgacacttcggtctaactcacgt
tctttagtcaatgcctcgagcaatgtctggtcgaatggtggcaaggtattcgtcgtggct
gtcctaacgggaggctacacgatcagtgaattctatccagccgtccagaggccagaggat
gcattctcagtatcgtcctttgatgccctgctttcagaagcgcctactatagcagcacga
atgatggcatcatggcgagccccagtaagcaagacattttctgctgacatagccttcatc
gtggactcctcgtcgtcagtgtctccgtttcagtattcacgcgtaaaacagtttgtagga
attctctctgagtacctgaacgttgaacccggacgttccagaggtgcctttgtcacgttt
ggcgaggcccctgtggaagtgttcaacttcgactcgtacaaactactctcagagtacaaa
acaaaagtcaacgaggctccttacttaggaagtgagcgcacaattagcagcgccttgagt
gcagcgggcattcttttttctaatgcgcgcggtgcgcacccgtggatagcaattctagtg
acgtcatggagaccatatgagatccatggcgccaggagtcttgaaatcctggctcgtcct
ttgttgagccgaggggtgtggctgtacgtcctctcgattggtgagaacccgtatgttggc
tggctgactccaatgcttgtggaaccaagagatgctttctcaatcatttcctatcgcgac
cttcctggaaatattggacctgttggcagacacatagtaaatgacaattttctcttcggc
cacgcgtcgttccaagttgatattatattcctaatggattcttcgttgggcgtaaactct
cagaactacgagattgagaaacgtttcgttcaacggatcgcaatgcatcttggtgttttc
accgggcgatcacgtgctgctctcgttgcgtacggaggaaattcgtgggtcgttttcggc
tttggtggctaccattcaaacgccgactttgaacttcgcttgaacgaagccctgatgttt
ggaggtgttcgacgagtggaccgagcattagacacggcagctgcgctgatgttgggcgct
cgaccaacggtgccgaaagcggtcatgcttattatgacaggagatccgagctgggaggct
gatgccatgccaattacggattcggctcgtccgctgcgtgatttgggagcgtggctgtat
gtcgttgctgttggacaaactgatccaagtgaactccaaaaggccactattagacctaca
gatatttattttgccatgtcgttttctagtctttatggatatatatcaccagtggcaaaa
tacattgccaacacctcagtgataacaggaatctcccaattgaacgctgacatcgttttc
atagtcgactgctcatcagatgttccataccgcgagtacagcacacaaaagacatttgtt
cggtccctaacccagtatctaaacatccagcccgaccgatcacgagcagctttgatagtt
tacggaagccgagccctcactgcagttcgtttggaaaggtcaggaacgttcggctccgag
ttgaccaaagcacctttcctcgcaggaaggcgaaggttcgatagcgcactcagtgccgca
agtacagtgtttgaaaatgcgcgggaaaatgtaccaaagatcatgatgctgttcatggcg
ggaaaacaagcgcaagtcagaggtgccacctcactgaaagatgcaattgaaccgcttcga
caagaaggagtgacgactttcatttttcgcattggtttagagcctgatttaaaggaacta
gttccagttgttgacagtcctgagaacattttcacattcgccagatttgctgacatggat
gcgagagttccttacgttgccaggcaaataccattcaactccgctctcctcggaagcatt
acctttgctattgagattgtttacatcctcgattcatccgatacagtcacgctcgaccaa
tacaaagacgaaaagacgtttgtcttatatcttgcccgctatttaaaaatggttccgtct
cactctagaaacgctgtcatatcatatggctcctctgcgatagtggtaacggacctaggt
caagcggatacgattcaagctttcgacctggcggtcaacaacgcttcaaagataggagga
cagcggcgaatggaccttgcaattgacacggcgcgaaccgttttaagtaatgcgcgagct
gcaattcccaaagttgttattcttcttaccactggaagccaaccaacgggaattaaagca
ggcgtcttagagtcttcaatgcagcggctctatgaaatgggagctcgattgtatgcagtc
tccatcaacgcaccgactgtcaatttaccacttaagaatacagatggttctgattggttc
cctgtgaggtcttttatggatttgccaattttttgttttctcgcttcttgtatctatccc
attttagtcgaaccagatcttttgtggaatgtaatggcgaatggacccacagtcgttcaa
attaaatatctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system