KEGG   Achromobacter denitrificans: APT56_25240
Entry
APT56_25240       CDS       T04244                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
adt  Achromobacter denitrificans
Pathway
adt02024  Quorum sensing
adt03060  Protein export
adt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:adt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    APT56_25240
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    APT56_25240
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APT56_25240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:adt02044]
    APT56_25240
Enzymes [BR:adt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     APT56_25240
Secretion system [BR:adt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   APT56_25240
  Eukaryotic Sec-SRP protein
   APT56_25240
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin AAA_25 CbiA LPD22 NTPase_1 TsaE AAA_24 APS_kinase 6PF2K AAA_33
Other DBs
NCBI-ProteinID: ALX86215
Position
complement(5647238..5648644)
AA seq 468 aa
MLDNLTQRLSRVVKTLRGEARLTEANTQEMLREVRMALLEADVALPVVRDFVARVKEKAL
GEEVASSLSPGQALVGVVHKELTALMGGDLGADSGELSLAVQPPAVILMAGLQGAGKTTT
TGKLARWLSEGQHTQHGRKTGKKKVLVVSADVYRPAAIDQLKSVAAQVGVDFLPSDPSQK
PEDIARNAVDHARRHHYDVLILDTAGRLGIDEAMMREIRALHDLVKPVETLFVVDAMQGQ
DAVNTARAFAEALPLTGVVLTKLDGDARGGAALSVRHVTGKPLKFVGVSEKLDGLEPFYP
ERMAQRVLGMGDIVSLVEQAQKNIDIAEAQKLAAKIKSGNKFDLNDFRDQLGQVKKLGDM
GSLLEKLPAQFQQAAGQLQGGQAEKQLRRTEGILNSMTAAERAKPELIKASRKRRIAAGS
GVPVQEVNRLLAQFEQMQGMMKQMKKGGMAKMMRAMGGMKGMGRFMKG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgctcgataacctaactcaacgcctgtcgcgcgtcgtcaagacactgcgcggcgaagcc
cgcctgaccgaggccaacacccaggaaatgctgcgcgaagtgcgcatggccctgctggaa
gccgacgtggcgctgcccgtggtgcgcgatttcgtcgcccgggtcaaggaaaaggcgctg
ggcgaagaagtcgccagcagcctcagccccggccaggccctggtgggcgtggtccacaag
gaactgaccgccctcatgggcggcgacctgggcgccgattccggcgaactgtcgctggcg
gtgcagccgcccgcggtcatcctgatggccggcctgcagggcgcgggcaagaccaccacc
accggcaagctggcccgctggctgagcgaaggccagcacacccagcacggccgcaagacc
ggcaagaagaaggtgctggtggtgtccgccgacgtctaccgcccggccgccatcgaccag
ttgaagagcgtggcggcgcaggtcggcgtcgatttcctgccgtccgatcccagccagaag
cccgaggacatcgcccgcaacgcggtcgaccacgcccgccgtcaccactacgacgtgctg
atcctggacacggccggccgcctgggcatcgacgaggccatgatgcgcgagatccgcgcg
ttgcatgacctggtcaagccggtcgaaacgctgttcgtggtcgacgccatgcagggccag
gacgcggtcaacaccgcccgcgccttcgccgaggcgctgccgctgaccggcgtggtgctg
accaagctggacggcgacgcccgcggcggcgcggcgctgtcggtgcgtcacgtcaccggc
aagccgctcaagttcgtcggcgtctcggaaaagctggacggcctggagccgttctacccc
gagcgcatggcgcagcgcgtgctgggcatgggcgacatcgtctcgctggtcgagcaggcc
cagaagaacatcgacatcgccgaggcccagaagctggcggccaagatcaagtcgggcaac
aagttcgacctgaacgacttccgcgaccaactcggccaggtcaagaagctgggcgacatg
ggctcgctgctggaaaagctgccggcccagttccagcaggccgccggccagttgcagggc
ggccaggccgaaaagcagctgcgccgcaccgagggcatcctcaattccatgacggccgcc
gagcgtgccaagccggaactcatcaaggcctcgcgcaagcgccgcatcgcggcgggttcg
ggcgtaccggtgcaggaagtcaaccgcctgctggcccagttcgagcagatgcagggcatg
atgaagcagatgaagaagggcggcatggccaagatgatgcgcgccatgggcggcatgaag
ggcatgggccgtttcatgaagggctga

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