KEGG   Achromobacter denitrificans: APT56_27665
Entry
APT56_27665       CDS       T04244                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
adt  Achromobacter denitrificans
Pathway
adt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:adt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    APT56_27665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adt03021]
    APT56_27665
   03400 DNA repair and recombination proteins [BR:adt03400]
    APT56_27665
Enzymes [BR:adt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     APT56_27665
Transcription machinery [BR:adt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     APT56_27665
DNA repair and recombination proteins [BR:adt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      APT56_27665
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 AAA_lid_4 RAD51D_N
Other DBs
NCBI-ProteinID: ALX86664
UniProt: A0A1Z3H3H2
Position
complement(6185546..6186532)
AA seq 328 aa
MSTQGFLKPRSIEVEPVGTHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMT
GVVHEYSTIPGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKTGAGTVLASDIELPHDVE
IINPGHAICNLTDAGKLEMQIKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRV
SYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGAGDSYEA
PVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtccactcaaggtttcctgaagccgcgctccattgaagtcgaaccggtcggcacccac
catgccaagatcgtgatggagccgttcgagcgcggctacggccatacgctgggcaacgcc
ctgcgccgcatcctgctgtcttcgatgaccggctacgcgccgaccgaagtccagatgacg
ggcgtggtgcacgaatactcgaccatcccgggcgttcgcgaagatgtcgtcgacatcctg
ctgaacctgaagggcgtggtcttcaagctgcacaaccgtgacgaagttaccctggtcctg
cgcaagaccggcgccggcaccgtgctggccagcgacatcgagctgccgcacgacgtcgag
atcatcaaccccggccacgccatctgcaacctgacggacgcgggcaagctggaaatgcag
atcaaggtcgagaagggccgcggctacgtgccgggcaacgtgcgcgcgctgtcggaagac
cgcacccacaccatcggccgcatcgtcctggacgcctcgttcagcccggtccgccgcgtc
agctacgcggttgaaagcgcccgcgtggaacagcgcaccgacctggacaagctggtcctg
gacatcgaaaccaacggcgtcatctcgcccgaggaagcggtgcgccagtcggctcgcatc
ctgatggaccagatctcggtcttcgccgccctggaaggcgccggcgattcgtacgaagcc
ccggtccgcggcacgccgcagatcgacccggtgctgctgcgtccggtcgacgacctggaa
ctgacggtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
atccagcgcaccgagaacgaactgctcaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtcctggccgcacgcggcctgacgctgggcatgaagctcgaaaactgg
cccccgctgggcctggagcgtccgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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