KEGG   Asticcacaulis excentricus: Astex_0187
Entry
Astex_0187        CDS       T01378                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
aex  Asticcacaulis excentricus
Pathway
aex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Astex_0187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aex03019]
    Astex_0187
   03016 Transfer RNA biogenesis [BR:aex03016]
    Astex_0187
Enzymes [BR:aex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Astex_0187
Messenger RNA biogenesis [BR:aex03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Astex_0187
Transfer RNA biogenesis [BR:aex03016]
 Prokaryotic type
  tRNA degradation factors
   Astex_0187
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 KH_2
Other DBs
NCBI-ProteinID: ADU11887
UniProt: E8RNX4
Position
1:197656..199938
AA seq 760 aa
MGLPGDRKTHMFDIKRKTIEWAGRKLTLETGRIARQADAAVLATYGETTVLATVVYARAP
KPGQDFFPLTVNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNE
VQVVVTVLSHDMENDPDILGMVAASAALTLSGVPFMGPIGGARVGVINDEYVLNPSLDQM
KESALDLVVAGTQDALMMVESEAQELSEDKMLGALMFAHAGMQPVIDAIIELAEHAAKEP
FEFEAEDFSDVVAKIKDLVGPDIIAAYAHKGKHERHAAVGEAKKKAAAVLVKSEENPEGY
EPAIFGSAFKECEADVLRRDIIDHGKRVDGRAVDKVRQIVSEVGVLPRTHGSALFTRGET
QALVVATLGTGEDEQFIDALEGTYKERFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAW
RAIRPMLPSAEEFPYTLRVVSEITESNGSSSMATVCGTSLSLMDAGVPLKRPVSGIAMGL
ILEKDGYAVLSDILGDEDHLGDMDFKVAGTELGITSLQMDIKVPGITEEIMTKALRQANE
GRLHILGEMNKAISGAREELGEFAPKIETIKIATDKIREVIGSGGKVIREIVEKTGAKID
IGEDGTIKIAASEQSKIDAARDWIKSIASEPEIGAIYKGKVVKVVDFGAFVNFFGAKDGL
VHISQIKNEKVAKTSDVLSEGDEVKVKFLGFDDRGKTKLSMKVVDQETGEDLTEKLAAEK
AARDEARAASGEAPEADGDEGGEERSGGDRPRRSRRPRRD
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgggcctgccgggtgacagaaagacacacatgtttgacatcaaaagaaaaaccatcgag
tgggccgggcgcaaactgacgctcgaaaccggccgtatcgcccgtcaggcggacgccgcc
gtgctggccacctacggtgaaaccaccgtgctggcgaccgtggtttatgcccgcgcaccg
aagccgggtcaggacttcttccccctgacggtcaactatcaggaaaagaccttcgccgcc
ggcaagatcccgggcggctacttcaagcgtgaaggtcgccccagtgaaaaagaaacgctc
gtttcgcgcctgatcgaccgtccgatccgccccctgttcgtcaagggtttcaagaacgag
gttcaggtcgtcgttacggtgttgtcgcatgacatggaaaacgatccggacatcctcggc
atggtcgccgcctctgcggccctgaccctgtcgggcgtgccgttcatgggccccatcggc
ggcgcccgcgtcggtgtcatcaatgacgaatatgtcctgaacccttcactggatcagatg
aaggaaagcgcgctcgatctcgtggtcgctggtacgcaggacgccctgatgatggtcgag
tccgaagcgcaggaactgtccgaagacaagatgctgggcgcgctgatgttcgcccatgcc
ggtatgcaaccggtcatcgacgccatcattgagctggctgaacacgccgccaaggagccc
ttcgaattcgaagccgaagatttctcggacgtcgtggccaagatcaaggacctcgtcggc
ccggacatcatcgcggcctatgcccataagggcaagcacgagcgtcacgccgccgttggc
gaagccaagaagaaggccgcggctgttctggtgaagtctgaagagaacccggaaggctat
gagcctgccatcttcggttcggccttcaaggaatgcgaagccgacgtcctgcgtcgtgac
atcatcgaccacggcaagcgcgttgacggtcgtgccgttgataaggttcgtcagatcgtg
tcggaagtcggcgttctgccgcgcacccacggttcggccctgtttacccgcggtgaaact
caggctctggtcgtggccacgctgggcaccggcgaagacgagcagttcatcgacgcgctc
gaaggcacctataaggagcgcttcctgctgcactacaacttccctccgtactcggtgggt
gaagcgggccgcatgggttcgccgggccgccgcgaaatcggccacggcaagctggcgtgg
cgcgccatccgtccgatgctgccgtcggcggaagaattcccgtacaccctgcgcgttgtc
tccgagatcacggagtcgaacggctcgtcctcgatggccacggtttgcgggacctcgctg
tcgctgatggacgccggcgtgccgctgaagcgtccggtgtcgggtatcgccatgggcctg
atcctcgaaaaggacggctacgcggttctgtcggacattctgggtgatgaagatcacctg
ggcgacatggacttcaaggtggccggtacagagctcggtatcacctcgctgcaaatggac
atcaaagttccgggcatcaccgaagagatcatgaccaaggcgttgcgtcaggccaatgaa
ggtcgtctgcatatccttggcgagatgaacaaggccatttcgggtgcccgcgaagagctg
ggtgaatttgcgccgaagatcgagacgatcaagatcgcgaccgacaagatccgcgaagtc
atcgggtcgggcggcaaggtcatccgcgaaatcgtggaaaagaccggtgccaagatcgac
atcggcgaagacggcaccatcaagatcgccgcttccgaacagtcgaagatcgacgcggcc
cgcgactggatcaagtccatcgcttcagagcctgaaatcggtgccatatataagggcaag
gtcgtgaaggttgtcgatttcggtgccttcgtgaacttcttcggtgccaaggacggcctt
gtccacatctcgcagatcaagaacgaaaaggtcgccaagacctcggacgtcctcagcgaa
ggcgacgaagtgaaggtgaagttccttggctttgacgatcgcggcaagaccaagctgtcg
atgaaggtcgttgatcaggaaaccggcgaagacctcaccgaaaagctggccgccgaaaag
gccgcccgtgacgaggcccgtgcggcttcgggcgaagcaccggaagccgacggtgatgaa
ggtggcgaggaacgttcgggcggtgaccgtccgcgccgctcgcgtcgcccgcgtcgtgac
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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