KEGG   Aspergillus fumigatus: AFUA_6G11460
Entry
AFUA_6G11460      CDS       T01017                                 
Name
(RefSeq) nonsense-mediated mRNA decay protein Upf3
  KO
K14328  regulator of nonsense transcripts 3
Organism
afm  Aspergillus fumigatus
Pathway
afm03013  Nucleocytoplasmic transport
afm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:afm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AFUA_6G11460
   03015 mRNA surveillance pathway
    AFUA_6G11460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afm03019]
    AFUA_6G11460
Messenger RNA biogenesis [BR:afm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     AFUA_6G11460
   mRNA cycle factors
    P-body specific factors
     AFUA_6G11460
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 3508334
NCBI-ProteinID: XP_751029
UniProt: Q4WM23
Position
6:complement(2847643..2849442)
AA seq 581 aa
MTQTSDGKSTGGVLQIPAAATQKNTSTTSRKAPKPPAPRLKLLVRRLPPGLTQSEFENAM
GPEWMVGAGKVDWYQYKPGKVSKDYAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFVDAR
NTFNDPVLLGPPSLEFAPYAKIPGSRVRKDARQGTIDQDPEFIAFLESLTQPITKPTTVD
TPTDAEEKKETVTTTPLVQYIKEKKANKAKEASSKSSRHAKGEKESKSEKVQAKKLLQRQ
DKDAALAPTGDKAEKKSRASDKASKEAVKAANRAANAAAKQAAKPAATQNTSKDTAQPAS
TERKRERNNIAVAAKILQRDLGLAPSGGRRRAGKGGSTETDSSKKEPDAAITADSGKKDT
KSGKPMSPSTPRSKANATPPSGEPAPSRAQSGPNAGPTSAPSAQKQSKSAKGKPAAPITS
PTATQAFLKHANPSQGVTEPLLETAFAPFGKILKVEIDKKKGFGYIDFAEPDGLQKAIAA
SPVTVAQSQVVVLERKANPGAEKTRGKGRSEQPAPNNGSNSNSNSNRGAKQGSDGGSGPA
TPSSSRGPRGGRGSRNKGGSKGNGANASSNTPSGKTGGETK
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgacgcagacttccgacggcaagtcaacagggggggtacttcagattcctgcagctgcc
acacagaagaatacatcaacaacctctaggaaggctccgaagccccctgctccgcgactc
aagttgctcgtgagacggttaccaccgggtttgacccaatctgagttcgaaaatgccatg
ggtccagagtggatggttggagcaggaaaagtcgactggtaccagtacaagccaggcaag
gtatccaaagactatgccaaaccttcgagaccctcccgcgcctacatccatgttacatcc
agcgagcatattgcgcctctatccgataaagtccgacaaacatcgttcgtagatgctcgc
aacacgttcaatgatcccgtactcttgggaccgccgtctctagagttcgctccctacgcc
aaaattcctggtagtcgtgtacggaaggatgcccgccagggtacaattgaccaagatccc
gaatttatcgcgttcctcgaaagtctgacacagccgattacaaaacctaccactgttgat
acacctaccgacgccgaagaaaagaaggaaaccgttaccactacgcctctcgtgcagtat
atcaaggaaaagaaggccaacaaagcgaaagaagcctccagcaagtcttccaggcatgcc
aaaggcgagaaggagtccaaatcggagaaggtacaagccaagaaacttttgcaacgtcag
gacaaggatgctgccctggcacctactggagacaaggcagagaagaagtcaagggcctca
gacaaggcgtcgaaagaagcagtgaaagcggcaaacagggccgccaatgctgctgctaag
caagcggctaaaccagcagcgacacaaaatactagcaaagatactgctcagcctgcttca
actgaacggaaacgcgagcgtaataacatcgctgtggcagccaagattcttcaacgagac
ttggggcttgcaccttcaggcggccgtcggagggctggtaagggtggttcgacagagacg
gactcgagcaagaaagaaccggacgctgctattactgcagatagcggcaagaaggataca
aagtctgggaagcccatgtcaccatcaactccaaggagcaaagccaatgctacacctcca
tcaggcgagccagcaccatctcgtgctcagtctggcccgaatgcaggccctacaagcgca
ccatccgcacagaagcagtcgaaatcagcgaaaggcaagccagccgctccaattacttcg
cctacggctacacaggcattcctcaagcatgccaatccatcgcagggagttacagaacca
ttacttgaaaccgcatttgcacctttcggaaagatcttgaaggtggagattgacaagaag
aaggggtttggctacatcgactttgcagagccggatggtcttcagaaggcaattgccgct
agtcctgtcacggtcgcgcagagccaagtcgtcgtgcttgaacgcaaggccaatcctggt
gcagaaaagactcgcggcaagggacgaagcgagcaacccgccccgaataatggcagcaac
agcaacagcaacagcaatcgtggtgccaagcagggctcagatggaggatctggaccagcg
acaccatcctcgtcgcgtggaccacgtggaggtcgcggatccaggaacaagggcggttcg
aagggcaacggagcaaatgccagttcaaacacacctagtgggaagactggtggggagacg
aaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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