KEGG   Anopheles gambiae (malaria mosquito): 1274316
Entry
1274316           CDS       T01036                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
aga  Anopheles gambiae (malaria mosquito)
Pathway
aga03020  RNA polymerase
aga03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    1274316
  09124 Replication and repair
   03420 Nucleotide excision repair
    1274316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aga03021]
    1274316
   03400 DNA repair and recombination proteins [BR:aga03400]
    1274316
Enzymes [BR:aga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     1274316
Transcription machinery [BR:aga03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     1274316
DNA repair and recombination proteins [BR:aga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      1274316
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 1274316
NCBI-ProteinID: XP_313416
VectorBase: AGAP003648
UniProt: Q7QAK7
Position
2:complement(40321223..40325195)
AA seq 1175 aa
MYENEEDHFEEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIELTAEAQHSSGEIENPTRYLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKLVEGQDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRVIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLRKNHIDMLKDRDYNNYGWQVLVASG
VVEYIDTLEEETVMIAMTPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPNRQTCQG
MRNALYDKLDEDGIIAPGLRVSGDDVVIGKTITLPETDDDLDGTTKRYTKRDGSTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMAMNIAPRLMVL
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgtacgagaatgaagaggaccacttcgaggaggaagatccggaggagatttcgcacgag
ctgtggcaggaagcatgctggatagtgatcaacgcttacttcgacgagaagggtctcgtg
cggcagcagctggacagcttcgacgagttcatccaaatgtccgtccagcgcatcgtcgag
gactcgccggccatcgagctgacggccgaagcgcaacactcgtcgggcgagatcgaaaac
ccgacgcgctacttgctcaagttcgaccagatctacctgtcgaaaccgacgcactgggaa
aaggatggttccccctcgccgatgatgccgaacgaggcgcgcctccgcaaccttacctac
tcggccccgctctacgtggacatcactaagacgaagctggtcgagggccaggatccggta
gaaacgcagcatcagaaaacgttcattggcaagattccgatcatgctgcggtccacgtac
tgtctgctctcccagctgacagatcgtgatttgacggagctgaacgagtgtcccctcgat
ccaggcggctacttcatcatcaacggctcggagaaggtactgattgcgcaggaaaagatg
gccaccaacacggtgtacgtgttcagcatgaaggacggcaagtacgcgtacaagacggag
atccggtcctgtctggagcacagctcccggcccacctcgacgctgtgggtgaacatgatg
gcacgcggcggtcagagcatcaaaaagtccgccatcggccagcgcgtgatagcgatcctg
ccgtacgtgaagcaggagataccgatcatgatcgtgttccgtgcgctcggattcgtcgcc
gaccgggacatcctcgagcacatcatttacgactttgacgatccggaaatgatggagatg
gtaaagccctcgctggacgaagcgttcgtcgtgcaggagcagaacgtggccctcaatttc
atcggagcgcgcggtgctcggcccggcgtcaccaaggacaagcgtatcaagtacgcgaag
gaaattctgcaaaaggaaatgttgccccacgttggtgtgtccgatttttgcgaaaccaag
aaggcgtacttcctcggctacatggtacatcggttgctgctggctgcgctcggacgccgc
gagctggacgatcgtgatcactacggcaacaagcgtctcgatctggccggtccgttgctc
gcgttcctgttccgcgggctgttcaaaaacctgatgaaggaggtgcgcatgtacgcacaa
aagttcattgatcgcggaaaggactttaaccttgagctggccatcaagacgaagatcata
acggacggattgcgctactcgttggccaccggtaactggggcgatcagaagaaggcccat
caggctcgggccggtgtgtcgcaggtgttgaatcgtctgacgttcgcctctacgctgagc
catttgcggcgcgtcaattcaccgatcgggcgtgacggcaagctggccaagccccgccag
ctccacaacaccctgtggggcatgatctgtccggccgaaacgccggaaggagcagccgtc
gggctggtgaagaacctggcgctcatggcgtacatttcggtcggttctcagccgtctccg
attctcgagttcttggaggagtggtccatggaaaacttggaagaaattgccccctcggcg
attgccgacgcgaccaagatctttgtgaacggttgctgggtcggcattcatcgcgatccg
gagcagctgatggccacgctgcggaagctgcgccgacagatggatattatcgtgtcggaa
gtatcgatgattcgcgatatccgcgaccgtgagatccgcatctacaccgatgcaggtcgc
atctgtcgtccgctgctgattgtggagaatggatcgctgctgctgcgcaaaaatcacatc
gacatgttgaaggaccgcgactacaacaactacggctggcaggtgctggttgcttccggt
gtggtggagtacattgacacgctggaggaggaaacggtcatgattgcgatgacaccgtac
gatctgaaacaggacaaggagtacgcctactgtacgacctacacgcactgcgagatccat
ccggcgatgattttgggcgtctgcgcttccatcatcccgttcccggatcacaaccagagt
ccgcgtaacacctaccaaagcgctatgggtaagcaggcgatgggtgtgtacatcacgaac
ttccacgtgcgcatggacacgctcgcgcacgtgctttactacccgatgaagccgctcgtg
acgacgcggtcgatggagtatctgcggttccgtgagctgccggccggtatcaactcgatc
gtggccatcctgtgctacacgggctacaaccaggaggacagcgttatcctgaacgcgtcc
gccgtcgagcgtggcttcttccggtccgtgttttaccgttcgtacaaagactcggaaagc
aagcgcatcggcgatcaggaggagcagttcgagaagccaaaccggcagacgtgccagggc
atgcggaacgccctgtacgacaagctggacgaggacggtatcattgcgccggggctgcgt
gtgtccggagatgatgtggtcattggcaaaacgattaccctgccggaaacggacgacgat
ctggacggaaccaccaagcgctacaccaagcgagacgggtcaacgtttttgcgcaactcc
gagaccggtatcgtcgatcaggtgatgctgacgctcaacagcgagggctacaagttctgc
aagatccgtgtgcgctcggtgcgtatcccgcagatcggcgacaagtttgcgtcgcgccac
ggacagaaaggtacgtgcggtatacagtatcgccaggaggacatgccgttcacgtgcgag
ggcattacgccggacatcatcattaacccgcacgccatcccgtcccgtatgaccattggg
catttgatcgagtgcatccagggcaagctgggctcgaacaagggcgaaatcggcgacgcc
acgccgttcaacgatgcggtcaacgtgcagaagatctccaccttcctgcaggagtacggc
taccatctgcgcggcaacgaggtcatgtacaatgggcacacggggcgcaagattaacgcg
caggtgttcctcggcccgacctactaccagcgtctgaagcatatggtggacgacaaaatc
cactcgcgagcccgcggtccggtacaaattttggtccgacagcccatggagggtcgtgca
agggacggcggtctgcgtttcggtgagatggagcgcgattgtcaaatctcgcacggtgcg
gcacagtttctgcgcgagcgtctgttcgaggtgtccgacccgtaccggattcacgtgtgc
aacttctgtggcctgatcgcgatcgccaatctgcgcaacaacacgttcgagtgcaaggga
tgcaaaaataagacacagatatcgcaggtgaagctcccatacgcggcaaagctcttattc
caggaactaatggcaatgaacattgcacctcgtttgatggtactataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   VECTORBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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