KEGG   Anopheles gambiae (malaria mosquito): 1275295
Entry
1275295           CDS       T01036                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
aga  Anopheles gambiae (malaria mosquito)
Pathway
aga03022  Basal transcription factors
aga03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    1275295
  09124 Replication and repair
   03420 Nucleotide excision repair
    1275295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aga03021]
    1275295
   03400 DNA repair and recombination proteins [BR:aga03400]
    1275295
Transcription machinery [BR:aga03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     1275295
DNA repair and recombination proteins [BR:aga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     1275295
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR C1_2
Other DBs
NCBI-GeneID: 1275295
NCBI-ProteinID: XP_314533
VectorBase: AGAP010559
UniProt: Q7PPS5
Position
3:64189085..64190922
AA seq 421 aa
MADEEDPKEYRWETGYEKTWEAIKEDDDGLIEGSVSDIIQKAKRKRQAMKRGFSKLGMMR
HLYVLLDCSEAMTVPDLKPTRFICSLKLLELFIEEFFDQNPISQLGVIAMKAKRAEKISE
LGGTSRKHIKAVHALTNGVPLVGEPSLQNGLELALKTLRMIPQHASREILVIMGSLTSCD
PNDVHLTIENLKTEGVRCSVLSLSAEIRICKFLCTETGGLFGAVLDDAHYKDQLLQHIDP
PQAGNQQEFSLIKMGFPHGKTESGKEPPLTMCMCHIDSVDEPAKLTSGGYHCPQCYSKYC
ELPVECSACGLTLASAPHLARSYHHLFPVPHFNELPLEQVQVQEPRDPPVTNCYACQKTL
ASGTDKMVYECDACKQVFCIDCDIFIHETLHSCVGCTTIPASAQTLQARKPVPPPHSMSI
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcggacgaagaggatccaaaggaatatcgctgggagacgggatacgagaaaacatgg
gaagcaatcaaagaggacgacgatgggcttatcgaaggatcggttagtgatatcatccaa
aaggctaagcgcaagcgtcaagcaatgaagcgcggcttcagcaagctcggcatgatgcgc
cacctgtacgtgttgctcgactgctccgaagcgatgacggttccggatctgaaaccaacg
cgcttcatctgttctcttaaactgctagaactatttatcgaggagtttttcgaccagaat
cccatctcccagcttggcgtaattgcaatgaaggcaaagcgcgcggaaaagatttccgaa
ctcggcggtacctcccggaagcacattaaagcggtgcacgcactaaccaatggcgtaccg
ctggtcggtgaaccatcgctacagaacggtctggagctggcgctgaagacgctacgaatg
attccacaacacgcaagcagagaaattttagttattatgggaagtttgaccagctgcgat
ccgaacgatgtccatctgacgatcgaaaatcttaaaacggaaggcgttcgatgctccgtg
ctgtctctgtcggcggaaatccgtatctgcaagttcctgtgcaccgaaacgggcgggttg
tttggtgccgtgctggacgatgcacactacaaggatcagctgcttcagcacatcgatcca
ccgcaggccggcaatcagcaggaattttcgttgattaagatgggtttcccgcacggcaaa
acagaatcgggcaaggaaccaccgttgacgatgtgtatgtgccacatcgacagtgtggat
gagccggccaaactgacctcgggcggttatcactgcccccagtgctacagcaagtactgt
gagctaccggtggaatgttcagcgtgcggtttaacgttagcctctgcgccacatttagcc
cgcagctatcatcatctgtttccggtgccacattttaacgaactcccgctagagcaggta
caggtgcaggaaccgcgcgacccaccggtgacaaactgttacgcctgccagaaaacgctc
gcaagcggcacggataaaatggtgtacgagtgcgacgcctgcaagcaagtgttttgcatt
gattgcgatattttcatacacgaaacgctgcattcatgtgtagggtgtacgacgattccg
gcatcggctcaaactttacaggcacgaaagccggtaccaccaccgcacagtatgtctatc
atataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   VECTORBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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