KEGG   Ashbya gossypii (Eremothecium gossypii): AGOS_AGR122C
Entry
AGOS_AGR122C      CDS       T00167                                 
Name
(RefSeq) AGR122Cp
  KO
K13126  polyadenylate-binding protein
Organism
ago  Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03015  mRNA surveillance pathway
ago03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ago00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AGOS_AGR122C
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGOS_AGR122C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ago03019]
    AGOS_AGR122C
   03041 Spliceosome [BR:ago03041]
    AGOS_AGR122C
Messenger RNA biogenesis [BR:ago03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     AGOS_AGR122C
   mRNA cycle factors
    Stress granule specific factors
     AGOS_AGR122C
Spliceosome [BR:ago03041]
 Complex C
  Other components
   Complex C specific factors
    AGOS_AGR122C
SSDB
Motif
Pfam: RRM_1 PABP RRM_occluded RRM_7 RRM_3 YflT NleF_casp_inhib Transposase_24 PNPase KinB_sensor DUF6327
Other DBs
NCBI-GeneID: 4623090
NCBI-ProteinID: NP_986788
UniProt: Q74ZS6
Position
VII:complement(1295768..1297525)
AA seq 585 aa
MSDITDKTAEQLEQLKIEEQTAPTTTESETPKVETSGASLYVGELEPTVSEALLYDIFSP
IGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSL
RKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDAR
DAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFG
KYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYER
LQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGN
SRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRNQLAQQIQARNQMRFQ
HANAAAAAAVAGLPGQFMPPPMYYGGIPPRVPFQGPNPQMAGMPKNGAMPPQQFGRPGPM
YGGFAPQGQFPRNGQQQQFYQQKQRQALGEQLYQKVFAKTQDDEAAGKITGMILDLPPQQ
VIQLLENDELLEQHFQEAHAAYQKFKEDQEAQAAAAAAAAADARE
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgtcagacattacggataagaccgcggagcagctagagcagttgaagatcgaggagcag
accgcacctacgacgacggagtcggagacgccgaaggtggagacctccggcgcctcattg
tacgtcggagagttggagcctacggtgtcggaggccttgttgtacgacatcttctcgccc
atcgggtcggtgtcgtcgatccgtgtgtgtcgtgatgcgatcaccaacacgtcgctcggg
tacgcatacgtgaacttccacgaccacgaggccggccccaaggcgatcgagcagttgaac
tacactttgatcaagggcaagccttgccggatcatgtggtcccagcgcgacccctcgctc
cgcaagaagggctcgggcaacatctacatcaagaacttgcacccagctattgacaacaag
tcgctccacgaaaccttttctacgttcggcaacatcctgtcgtgcaaggtggccactgac
gagaacggagtttcgcgcggctttggctttgtgcactttgagaacgagtcagatgctcgt
gatgccatcgaggccgtcgatggtatgttgatgaacgaccaggaggtttacgttgcgttg
cacgtatccaagaaggaccgccagtccaagttggaggaggttaaggcaaagttcaccaac
gtgtacgtgaagaacatcgaccaagagacctctcaggaggagttcgaggagctctttggc
aagtacggtaagatcacctctgctgttctggagaaggactccgagggcaagctacgcggc
tttggtttcgtcaactttgaggaccacgctgcggctgccaaggctgtcgacgagctaaac
gagcttgagttcaagggccagaagctatacgttggaagagcacagaagaagtacgagcgc
ttgcaggagctcaagaagcagtacgaggcggctagactagagaagcttgccaagtaccag
ggtgttaacttgtttgtcaagaacttggacgactccatcgacgatgagaagttgaaggag
gagtttgctccattcggtaccattacctctgcaaaggtgatgagagacgagaccggcaac
tctagaggctttggctttgtctgcttctccactccagaggaggccaccaaggctatcact
gagaagaaccagcagattgtcgctggcaagcctttgtacgttgccattgctcaaagaaag
gaggtcagaagaaaccagttggcccagcagatccaggccagaaaccagatgcgcttccag
cacgccaacgctgctgctgccgccgctgttgccgggttgccaggccagttcatgcctcct
ccaatgtactacggcggcatccctccacgtgtgccattccagggtcctaaccctcagatg
gccggcatgccaaagaacggcgccatgcccccacaacagttcggcagaccaggcccaatg
tacggtgggttcgcgccccagggtcagttcccacggaacggccagcagcagcagttctac
cagcagaagcagagacaggcgttgggcgagcaattgtaccagaaggttttcgctaagact
caggacgatgaggccgccggtaagatcaccggcatgattttggacctaccaccacagcag
gtcatccaattgctcgaaaacgacgagcttttggagcagcacttccaggaggcccatgct
gcctaccagaagttcaaggaggaccaggaggcccaggccgccgccgccgctgccgccgcc
gcagacgcccgcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system