KEGG   Agrobacterium tumefaciens H13-3: AGROH133_02806
Entry
AGROH133_02806    CDS       T01432                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr03030  DNA replication
agr03430  Mismatch repair
agr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AGROH133_02806 (dnaQ)
   03430 Mismatch repair
    AGROH133_02806 (dnaQ)
   03440 Homologous recombination
    AGROH133_02806 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agr03032]
    AGROH133_02806 (dnaQ)
   03400 DNA repair and recombination proteins [BR:agr03400]
    AGROH133_02806 (dnaQ)
Enzymes [BR:agr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AGROH133_02806 (dnaQ)
DNA replication proteins [BR:agr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AGROH133_02806 (dnaQ)
DNA repair and recombination proteins [BR:agr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AGROH133_02806 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ADY63002
Position
circular:3130..3831
AA seq 233 aa
MREIIFDTETTGLESKLDRVIEIGGIELNNHFPTGRTLHIYINPEDRKVHPDALAVHGIT
DDFLKDKPKFAEVVDEIREFFEGARWVAHNATFDMGFINAEFARLGIAPVSSELVTDTLS
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQTALGFGSGS
KQQAVTIEDDDVPHEPLQRPHPLPSRLDAETIAAHGKLVLGMGDKAIWNRYQN
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgtgagatcattttcgatacggaaaccacaggccttgagtcgaaactggaccgcgtg
atcgaaatcggcggaatcgagctcaacaaccattttccgaccggccgcacattgcatatt
tatatcaacccggaagatcgaaaggttcacccggacgcgcttgcggtgcacggcatcacc
gacgacttcctgaaagacaagccgaaattcgccgaagtcgtcgacgaaatccgcgaattt
tttgaaggtgcccgctgggtggcgcataatgcgacattcgacatgggttttatcaatgcg
gaatttgcccgcctcggcattgcgccggtctcatctgaattggtgacggatacgctttcg
cttgcacgccgcaagcacccgatgggtccgaattccctcgacgcactttgccggcgttac
gggatcgacaactcccaccgcaccaaacacggcgcgcttctcgactccgaacttctcgcc
gaagtctacatagaaatgattggtgggcgccagacagcgctcggtttcggttccggctcc
aaacagcaagcggtcactatcgaggatgatgatgttccgcatgagccgttgcaaaggccg
catcctctaccatcaagacttgatgcggagaccatcgcggcgcacggcaagctcgttctc
ggcatgggcgacaaggcgatctggaaccgttaccagaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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