KEGG   Agrobacterium tumefaciens H13-3: AGROH133_11486
Entry
AGROH133_11486    CDS       T01432                                 
Name
(GenBank) ABC transporter, nucleotide binding/ATPase protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:agr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AGROH133_11486
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:agr02000]
    AGROH133_11486
Transporters [BR:agr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    AGROH133_11486
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY AAA_16 SMC_N AAA_29 AAA_22 Mg_chelatase AAA nSTAND3 AAA_25 AAA_23 AAA_5 NACHT RsgA_GTPase PRK nSTAND1 ATP-synt_ab CbiA AAA_24 AAA_33 AAA_18 IstB_IS21 RNA_helicase MMR_HSR1 DUF87 PhoH DUF2813 ATPase
Other DBs
NCBI-ProteinID: ADY66591
Position
linear:947678..949333
AA seq 551 aa
MTNLVEIRGLKVEATTDSGRRIQIIRGVDIDIADGEIVALIGESGSGKTTIALTLMGYAR
PGCRISGGSVTVAGRDMVQLSEMERAKIRGTKISYVPQSAAAAFNPAQKIIDQVIEVTRI
HDLMPPQEARQRAVELFKALSLPNPETIGDRYPHQVSGGQLQRLSAAMALIGNPDLVIFD
EPTTALDVTTQIEVLRAFKSAMRKGGIGGVYVSHDLAVVAQIADRIVVLKGGEIQETGTT
TDILENAQHPYTRELLTAFNDKVRTVAPLKQSDAKPLLDIEKLIAGYGTKGDDHMPLVRA
VDSVSLAVYPGRNLGIIGESGCGKSTLARAIAGILPAASGHVIFEGRQLDADARQRTSDQ
LRRMQIVFQYADTALNPAKSIEDILGRPLTFYHGMRGKARDARIDQLLDMVKLPRSVRHR
HPSGLSGGQKQRVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQRELNLSYIF
ISHDLSVVETICDEIVVMYGGQKVEHLATEAIKSPTHPYSKLLFSSVPKLDPKWLDNLQQ
DAELVRAFSKR
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgacaaatcttgttgaaatccgaggacttaaagtcgaggcgaccaccgattccggccgc
cgtatccaaatcatcaggggtgtagacatcgatatcgccgatggcgagatagtcgcattg
atcggcgaaagcggctccggcaagaccaccattgcactgacattgatgggatatgcccgc
ccaggctgccgtatttccggcggcagcgtcacggtggcaggccgcgacatggtacagctt
tccgaaatggaacgggcgaagatccgcggtacgaaaatctcctacgtccctcaaagcgcc
gcagccgccttcaatccggctcaaaagattatcgaccaggtcatagaggtcacccgcatc
cacgatctgatgccgccgcaggaggcgcgccaaagagcggtggaactgttcaaggcattg
tcgctgcccaatcccgaaaccatcggcgaccgttatccgcaccaggtttccggcggccag
cttcagcgtctctccgcagccatggcgctgatcggcaacccggacctggtcattttcgac
gaaccgaccacggcactcgatgtgacgacacagatcgaggttctccgcgccttcaaatca
gcgatgcgcaagggcggtatcggcggcgtttacgtttcgcacgatctcgcagtcgtcgcc
cagattgccgaccggatcgtggtgctgaaaggcggcgagatacaggaaaccggtacgacc
acggatattctcgagaatgcccagcatccttatacgcgggagttgctcaccgcttttaat
gacaaggtacgcaccgtagcgccgctaaaacaaagtgacgcgaagccgctgctggatatc
gagaagctgatcgccggatatggaacgaaaggtgacgaccatatgccgctggtgcgtgcg
gtcgattccgtcagccttgcagtctatcccggacgcaatctcggcatcatcggcgaatcc
ggttgcggaaaatcgacgctggcgcgcgccattgccggcattctgcccgccgccagcggt
catgtcatcttcgaaggtcggcagctggatgccgatgcccgccaacgcaccagcgatcaa
ttgcgccgcatgcagatcgtcttccaatatgccgatacggcgctcaacccggccaaatcc
atcgaggatattctcggccggccgctgaccttttatcacggcatgagaggcaaggcgcgc
gacgcccggatcgaccagttgctggatatggtgaagctgccgcgctcggttcgccaccgc
catccttccggtctgtcgggcggacagaagcaacgcgtcaacttcgcccgcgcactcgca
gcagaaccatcgctcatcatttgcgatgaaattacgtcggcgcttgatacggtcgtcgca
gccgcgatcatcgacctgctcggcgaactccagcgagagctgaacctctcctacatcttc
atcagccacgatctctctgtggtggaaaccatctgcgacgaaatcgtcgtgatgtatggc
gggcagaaagtggagcatctggcaacggaagcgatcaagtcgccgacccatccctattcg
aagctcctgttttcctcggtaccgaagctcgacccgaaatggctcgacaatcttcagcag
gatgcagagttggtgcgagcgttttccaagaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (37)   

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