KEGG   Aeromonas hydrophila AL06-06: RY45_00195
Entry
RY45_00195        CDS       T03748                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ahh  Aeromonas hydrophila AL06-06
Pathway
ahh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ahh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RY45_00195 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahh03021]
    RY45_00195 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ahh03400]
    RY45_00195 (rpoZ)
Enzymes [BR:ahh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RY45_00195 (rpoZ)
Transcription machinery [BR:ahh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RY45_00195 (rpoZ)
DNA repair and recombination proteins [BR:ahh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RY45_00195 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AJQ52587
Position
complement(44434..44709)
AA seq 91 aa
MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEENDKPTVIALREIELGLVN
NQVMDTQDRYEQQEQEAAELAAVAAIAEGRG
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgttactgtagaagatgctgtaaaacaggtaggtaaccgttttgacctggtg
ctggtcgccgcccgccgcgcccgccaaatcgcggttcaaggcaaagatcccctggttgac
gaagagaacgacaagccgaccgtgatcgccctgcgcgagatcgaactgggtctggtgaac
aaccaggtgatggacacccaggaccgttacgagcagcaagagcaggaagccgccgagctg
gctgccgttgctgccatcgccgaaggccgcggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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