KEGG   Aeromonas hydrophila AH10: VU14_10430
Entry
VU14_10430        CDS       T03886                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03030  DNA replication
ahi03430  Mismatch repair
ahi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VU14_10430
   03430 Mismatch repair
    VU14_10430
   03440 Homologous recombination
    VU14_10430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahi03032]
    VU14_10430
   03400 DNA repair and recombination proteins [BR:ahi03400]
    VU14_10430
Enzymes [BR:ahi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VU14_10430
DNA replication proteins [BR:ahi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VU14_10430
DNA repair and recombination proteins [BR:ahi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VU14_10430
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_tau_5 DNA_pol3_gamma3 AAA RuvB_N AAA_16 AAA_22 AAA_5 AAA_14 AAA_18 AAA_2 ResIII nSTAND3 AAA_30 Rad17 AAA_19 TsaE VapE-like_dom TniB Mg_chelatase SKI DUF815 PatG_D Zeta_toxin PIF1 AAA_24 DNA_pol3_delta Herpes_Helicase
Other DBs
NCBI-ProteinID: AKA17261
Position
2346110..2348647
AA seq 845 aa
MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK
SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ
TQIAKQLEWVLDQEGQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLDSVLAM
LGTLDHRHLHQLLEAVLRQDAPATMAKITEIATLGPDFDQLHAELEGLLHRIAMAQLLPA
TVQEQGADADALLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTALEMTCLRMLAFSP
RREVLHPASLTALPPAMGGLATEARSGAAAPGKPQGAEPAPAASAAPLAPSAVAATMAPV
VMAEPAAVEPALERQDNGAALDPLFAEQDELLREAEHMGYEAATLPAASGEMPAEPFVVP
PSVPVMAEPEPESIPQAEDVADAEAVPSTVSSMQSLLGKRNLLRSRLRSEPSTATSAART
APAKPVAAARPATVMQPAVVTPPPAFEPQPVRVDGQGQASARPAPQTGYDELPPLDAYEE
SGSDYEEYLSQGFSDAFASAPLPERAAEALSPAPVPAAVARPQSDDLPPWDLDGSAPRQV
SAAPVAAPVTTPREVVASEPAPAASVMETIDWDELEGDSQPQAGEVAARLIPSSLLSSCG
DPWAELIARTGVGGRLRQLAINSVMSQQGDKVLLTLKPEQRHLISDRARADLAEIIGPEL
GQPVQVEVTLGSVPEQETPLEIEHRLYLGVREQITRDLEQDPNVQFLQQRFGAVLHHDSI
EPLSR
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgagctatcaggttctggcgcgtaaatggcgcccccatacgtttgaacaagtggtaggc
cagcatcatgtgctgaccgccttgaccaacgccctggatcagggacggctgcatcacgcc
tatctgctgagcggcacccgcggggtcggcaagaccaccatcgcccgcatcctggccaag
agcctcaactgcgagcaggggatcagcagccacccgtgcggggtgtgtgacacctgccgc
gagatcgatcagggcaacttcgtcgatctgctggagatcgatgcggcgtcgcgcaccaag
gtggaagatacccgcgagctgctcgacaacgtgcagtaccggccggcccgtggccgcttc
aaggtctatctcatcgatgaagtgcacatgttgtcgcgccacagcttcaacgcgctgctg
aaaaccttggaagagccgcccccctatgtgaagttcctgctggccaccacggatccgcag
aagctgccgatcaccatcctctcgcgctgcctgcagtttcatctgaagagtctggatcag
acccagatcgccaagcagctcgaatgggtgctggatcaagagggacaaccctttgaaccg
cgcgccctgttggcgctggccaaggcggctgacggcagcatgcgcgatgccctgagcctg
accgatcaggcactggctcatggcaatggcagcgtacgcctcgacagcgtgctggccatg
ctgggtacgctcgatcatcgccatctgcaccagctgctggaggccgtgctgcgccaggat
gcgccggccaccatggccaagatcaccgaaatcgccactctggggcccgactttgatcag
ctgcacgccgagctggaagggctgctccatcgcatcgccatggcgcagctgttgccagcc
accgtgcaggagcagggggcggacgccgatgccctgctgcagctggcccaggccatgagc
ccggaagaggtacagctctgctatcagatcgtgctgggcggccgtaaagacttgccctgg
gcaccggatggccgcaccgcgctggagatgacctgcctgcggatgctggccttctcgccc
cggcgtgaagtactgcaccccgccagcctgacggcgctgccccccgccatgggagggttg
gcgacagaggcgagaagtggcgcagcggcgccgggaaagccccagggggctgagccggcc
ccggctgccagcgcagcgccactggctccgtcagcggttgccgcgaccatggcccctgtg
gttatggccgagccagcagctgtcgagccagctttggagagacaggataacggcgctgcg
ctggatccgctgtttgccgagcaggatgagttgctgcgcgaggccgagcacatgggttac
gaggcggcgacgttgccggccgcgtccggcgaaatgccggcagagccgtttgtggttccc
ccttcagtgcctgtcatggccgagcccgagcccgaatcaatcccgcaggccgaggatgtg
gccgatgcagaggccgttccctcgacggtctccagcatgcaaagcctgcttggcaagcgc
aatctgctgcgcagtcgcctgcgtagcgaaccgtcgacggcgaccagcgctgcgcgcacg
gcgcccgccaaaccggtggctgccgccagaccggcaacggtgatgcagccagccgtcgtc
acgccacccccggctttcgagccgcaaccggtgcgggttgatgggcaagggcaggcgtct
gcccggccagccccgcagacggggtatgacgagttgccgccgctcgatgcctatgaagag
agcggcagcgactacgaagagtatttgagccaaggtttcagcgatgcgtttgccagcgcc
cctctgccggagcgggctgccgaggctttgtcgccggcacctgtccctgcggccgtggca
cgtcctcagtcagacgatctgccaccttgggatctggacggtagtgcgcctcggcaggtt
agcgctgcgcctgttgcagctcccgtgacgactcctcgcgaggtcgttgccagcgagccg
gcgcctgcggcctcggtgatggagaccatcgactgggacgagctggagggtgacagccag
ccgcaagcgggagaagtggcggccagattgatcccgtcctccctgctaagcagctgtggc
gatccctgggccgagctgattgcccgcaccggtgtcggtggtcgactgcgtcagctggcc
atcaactcggtcatgagccagcagggggacaaggttctgttgaccctcaaaccggagcag
cgccatctgatcagcgacagggcgcgcgccgatctggccgagatcatcggccccgagctg
gggcaaccggtgcaggtggaggtcacgctgggcagtgtgcccgagcaggagacgccgctg
gagatagaacatcgcctctatctcggggtgcgtgagcagatcacccgggatctggagcag
gatcccaacgtgcaatttttgcagcagcgatttggcgccgtgcttcaccacgacagcata
gagccgctgagtcgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (40)   

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