KEGG   Aeromonas hydrophila AH10: VU14_19725
Entry
VU14_19725        CDS       T03886                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ahi  Aeromonas hydrophila AH10
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahi03016]
    VU14_19725
Enzymes [BR:ahi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     VU14_19725
Transfer RNA biogenesis [BR:ahi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    VU14_19725
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1
Other DBs
NCBI-ProteinID: AKA18983
Position
4404456..4406477
AA seq 673 aa
MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIASQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARISSHARLTYDDVSDWAEHGKQLDIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKQVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPVAPTSE
ADAAPANEAPKAE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctctgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgaaaaagagaaggaagtggccgagccggatgccctgctggag
cagtccgtcacccgtttcgtggcccgcgtcaagatgttccgcgaccgcctcaacgtggtc
gccgatcacccgctgatcaaggatgccatcaaggcccgcgtcaagaaggggctggacgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcacgccctggtggac
ggcaacttctctgccgagatcacccagaagatcgcctcgcaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccaggtcgagccggcggatctgccggag
tggaaggtgatcgaagaggaagagctgccgcgcaccgatctgaccgcgacccccttcttc
accatcgacggcgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcctacgtggccgagggcagc
gagctggacaaggaagccgcccagcgcgccttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgtgcccgtctgctcatcgccgaggatggcctgctgctggaggagaccgag
ttcttcgccgcccgcatcagctcccacgcccgtctcacctatgacgacgtctccgactgg
gccgagcacggcaaacagctggatatcgacgccggcgtgctggcccagctgccgctgatg
aaggcgatgaccgaggcgcgcatcgcctggcgcaccgagcatgccctggtgttcccggat
cgtcccgactacgacttcgagctgggcgagaacggcgaagtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctcggcaagcaggtcggctacggcatcttcaacgtccacaccggctttgac
gaagagtccctcgacggtgccatcgatctgctgaaaagcgccgaggccccgttcgagaag
gaagagatcgccagcctgtccggcttctgcgccctgcgccgctggatcgacaacctggac
acccgctggctggatggcaagatccgccgcttccagagctatgcgctgatgtccgccgag
ccgggcgcccactacggcctggggctggatgcctacgccacctggacctcaccgatccgc
aagtacggcgacatggtcaaccatcgcctgctgaaggccgtcatcgccggcaagaccccg
ggtgagcgcccgagcctggagctcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgccggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgt
ctgcgcgagaacggcgccgtggtgttcatgcccgcccgccatatcctcgacaacaaggat
cggctggagtgcaactgggacaacggtcgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgctccctc
atcgccaagccggcggtggagctggtgccgggcccggcgccggtcgccccgaccagcgag
gccgatgccgcacctgccaacgaggcccccaaggccgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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