KEGG   Actinoalloteichus hymeniacidonis: TL08_01505
Entry
TL08_01505        CDS       T04472                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ahm  Actinoalloteichus hymeniacidonis
Brite
KEGG Orthology (KO) [BR:ahm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahm03032]
    TL08_01505
   03400 DNA repair and recombination proteins [BR:ahm03400]
    TL08_01505
Enzymes [BR:ahm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TL08_01505
DNA replication proteins [BR:ahm03032]
 Prokaryotic type
  DNA Topoisomerases
   TL08_01505
DNA repair and recombination proteins [BR:ahm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TL08_01505
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AOS61141
Position
308989..311751
AA seq 920 aa
MIVESPAKARKISSYLGGGFVVESSRGHIRDLPRGAADVPTKYKGQSWARLGVDVDNDFE
PLYIVTPDKKSTVSELKDALKDVDELYLATDGDREGEAIAWHLLQALKPKVPVRRMVFHE
ITESAIRAAAENPRDLDQYLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVAT
RVVVERERERLRFVSASYWDVAAILDGGESVTPRTFASRLVAVDGERVATGRDFGPDGVV
RSQDIRVLDETAARALASGLADAPLRVAAVDEKPYTRKPYAPFMTSTLQQEAGRKLRFSA
ERTMRTAQRLYENGYITYMRTDSTTLSDTAISAAISQATELYGAQYVSPKPRQYTRKVKN
AQEAHEAIRPAGEVFRTPGAVASELETDEFRLYELIWQRTIASQMADAKGTTMSVRIVGS
AATGEECTFASSGRTITFAGFLKAYVESVDSEAGGEADDAERRLPVLTVDQRVTAGELTP
EGHSTNPPPRYTEASLVKTLEELGIGRPSTYASIISTVQDRGYVWKKGSALVPSWVAFAV
VTLLERHFGRLVDYDFTAALEDELDGIAAGRQDRTSWLSGFYFGGDIGPEDSIGRAGGLK
KLVGSSVEQIDAREVNSIPMFADLEGRTVVVRVGRYGPYLERTTATDGENVEQQRANLPD
ALPPDELTQELAEKLFATPMEGRSLGTDPTSGHEIVAKDGRYGPYVTELLPEDAKGKPRT
GSLLKTMSLETVSLAEALKLLSLPRLVGKDPESGDEITAQNGRYGPYLKRGTDSRSLETE
EQLFTVTLDEALKIYAQPKKRGRSATAAPPLRELGNDPASEKPMVIKDGRFGPYVTDGET
NASLRKGDSVETVTDERASELLAERRAKVGTTKKPKRKAPAKTASKSTATKSTAAKPAAT
KSTKKPTTKAPTKGSTRNSG
NT seq 2763 nt   +upstreamnt  +downstreamnt
gtgatcgtcgagtcgcctgcgaaggcgcgcaagatctcctcctatctcggtggcggtttc
gtcgtcgaatcctcgcgaggtcacatccgcgacctgccgcgtggcgctgccgatgtcccc
acgaagtacaaggggcagtcatgggcgcggctcggcgtcgacgtcgacaacgacttcgaa
ccgctctacatcgtcacgccggacaagaagtccacggtcagtgaactcaaggacgctctg
aaggacgtcgacgagctctatctcgcgacggatggcgaccgcgagggcgaggcgatcgcc
tggcacctcttgcaggcgttgaagccgaaggtcccggtccggcgaatggtcttccacgag
atcaccgagtccgccatccgggcggcggcggagaatccccgcgatctcgaccagtacctg
gtcgacgcgcaggagacccgccgcatcctcgaccgcctctacggctacgaggtcagcccg
gtgctgtggaagaaggtgatgccgaaactgtccgcgggccgggtgcagtcggtggccacc
agggtcgtggtggagcgggagcgggaacgactccggttcgtctcggcctcgtactgggat
gtcgcggcgatcctggacggcggcgagtcggtcacgccgcgcaccttcgcgtcgcggctg
gtcgccgtcgatggcgaacgggtcgccaccggtcgtgacttcggtcccgatggagtggtg
cgctcccaggacatccgagtgctcgatgagacggccgcccgcgcgttggcctccgggctg
gccgatgccccgttgcgggtcgcggcggtcgacgagaagccttacacccgcaagccctat
gccccgttcatgacctccacgttgcagcaggaggcgggccgcaagctgcggttctcggca
gagcggacgatgcgcacggcgcagcgcctctacgagaacggctacatcacctatatgcgt
accgactccaccaccctgtcggatacggcgatctcggcggcgatctcgcaggccaccgag
ttgtatggcgcgcagtacgtgtcgccgaagccccggcagtacacccggaaggtcaagaac
gcccaggaggcgcacgaggccatccgcccggcgggcgaggtcttccggacgcccggcgcg
gtggcctcggagctggagacggacgagttccggctgtacgagttgatctggcagcgcacc
atcgcctcgcagatggccgatgccaagggcaccaccatgagcgtgcggatcgtgggttcc
gcagccactggcgaggagtgcaccttcgcctcctctggccgcacgatcaccttcgcgggc
ttcctcaaggcctatgtcgaatcggttgactccgaggcgggcggcgaggccgacgacgcg
gagcgcaggttgccggtcctgaccgtcgaccagcgggtgaccgctggcgagctgacgccg
gagggacacagcaccaacccgccgccgaggtacaccgaggccagcctggtcaagacgctc
gaagagctcggtatcggcaggccgtccacctacgcgtcgatcatcagcacggtgcaggac
cggggctacgtgtggaagaagggctcggcgctggtgccgtcctgggtcgccttcgccgtc
gtcacgctgttggagcggcatttcggcaggctggtcgactacgacttcaccgcagccctg
gaagacgagctcgacggcatcgcggcgggacgacaggaccgcaccagctggctgtccggc
ttctacttcggcggcgacatcggcccggaggactcgatcggccgagccggcgggctgaag
aaactggtgggctccagcgtcgagcagattgacgcgcgcgaggtcaactcaatcccgatg
ttcgccgatctcgaaggccggaccgtggtcgtccgggtcgggcgctatggcccgtacctg
gagcgcaccaccgcgaccgacggcgagaacgtcgagcagcagcgggcgaacctgccggat
gcgctgccgcccgacgagttgacgcaggaactcgccgagaagctgttcgccaccccgatg
gagggccggtcgctgggcaccgatcccaccagcggccacgagatcgtcgccaaggacggc
cgatacgggccttatgtgaccgagctgctgcccgaggacgccaagggcaagccccggacc
gggtcactgctcaagacgatgtcactggagacggtgtcgttggcggaggcgctcaagctg
ctctcgctgccgaggctggtgggcaaggaccccgagtccggtgatgagatcaccgcgcag
aacgggcgatacggcccgtatctgaagcgggggaccgactcccggtcgttggagaccgag
gagcaactgttcacggtcaccttggacgaggccctgaagatctacgcacagccgaagaag
cggggtcggtcggccaccgctgctccgccgctgcgggagctgggcaacgatccggcgagc
gagaagccgatggtgatcaaggacggtcgcttcggcccgtacgtgaccgatggagagacc
aacgcctcgcttcgcaagggtgactcggtggagaccgtgaccgacgagcgcgcgagtgaa
ctgctggccgagcggcgagcgaaggtcggtacgacgaagaagccgaagcgcaaggccccg
gcgaagacggcgagcaagtccaccgccacgaagtcgactgcggccaagcccgctgcgacc
aagtccacgaagaagcccacgacgaaggcgccgacgaagggttcgacgaggaactccggg
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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