KEGG   Aeromonas hydrophila pc104A: V429_20270
Entry
V429_20270        CDS       T03193                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ahp  Aeromonas hydrophila pc104A
Brite
KEGG Orthology (KO) [BR:ahp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ahp03009]
    V429_20270
Enzymes [BR:ahp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     V429_20270
Ribosome biogenesis [BR:ahp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    V429_20270
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM MTS Methyltransf_25 Cons_hypoth95 Methyltransf_15 PrmA PCMT Met_10 Methyltransf_11 N6_Mtase UPF0020 RrnaAD AKAP7_NLS Methyltransf_32 N6_N4_Mtase
Other DBs
NCBI-ProteinID: AHX71072
Position
complement(4399034..4400386)
AA seq 450 aa
MPLVGHQHQIEILELTDKGDGKGRLFDRPLFVEGLLPGEQALVELTEVKPNYLHGKVTEL
LQPSADRVADFCPNTECGGCQVRPLAYPAQLKLKQALVESALEQAGLGDTTVRTILGMDS
PFAYRNKAQYAVRGCDAGAEIGFYRKHSHDLITADDCAVQDSLHVELNARVRSWMREHNI
AAYDEVNHTGCVRNLMTRKGFKSGELMVVLVTLGEELPFEAELLAALSDLPVTTLVQNIN
EERTNRILGATNRVLLGEGVIRDKIHELEFEISPLSFFQNNPSQTDVLYSSALEYAELTG
NETVFDIYCGIGTISLFLAGKAAKVVGIESVESAISDARRNAALNGIEHTEFHVGKAEQL
MPELHAQGVTADVVVMDPPRKGCDKAVLQTLVAMAPRRLVYVSCNPQTLARDLAWLVKQG
FVLDEVQPVDMFPHSMHVEAVARLSLPAKA
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgccgttagtgggacatcaacaccagatcgagatcctggaactgaccgacaaaggagat
ggcaaaggacgcctgttcgaccgccccctgtttgtcgaaggtttgctgcccggtgagcag
gcgctggtggagctgaccgaggtcaagcccaactatctgcacggcaaggtgaccgagctg
ctccagccctccgccgatcgggtcgccgacttctgccccaacaccgaatgcggtggctgc
caggtgcgcccgctggcctatccggcccagctcaagctcaagcaggcgctggtggagagt
gcactggaacaggccgggttgggtgataccaccgtcaggacgatcctcggcatggacagc
ccgtttgcctatcgcaacaaggcccaatatgcggtgcgcggttgcgacgccggcgccgag
atcggcttttatcgcaaacactcccatgacctcatcaccgccgatgattgcgcggtgcag
gactccctgcacgtcgagctgaacgcccgggtacgcagctggatgcgcgagcacaacatc
gccgcctatgacgaagtgaaccacaccggctgtgtgcgcaacctgatgacccgcaagggc
ttcaagagcggcgagctgatggtggtgctggtgaccctgggcgaggagctgccgtttgaa
gccgagctgctggcggccctgagtgatctgccggttaccaccctggtgcagaacatcaac
gaggaacgcaccaaccgcatcctgggtgccaccaaccgggtgctgctgggcgaaggggtg
atccgcgacaagatccacgagctcgagttcgagatctcgccgctctccttcttccagaac
aacccgagccagaccgatgtgctctactccagcgccctcgagtatgccgaactgaccggc
aacgaaacggtgttcgacatctattgcggtatcggcaccatctccctgttcctggccggc
aaggctgccaaggtggtggggatcgagtcggtggagagcgccatcagcgatgcccgtcgc
aacgccgccctcaacggcatcgagcacaccgagttccacgtcggcaaggccgagcagctg
atgcccgagctgcacgcccagggcgtgaccgctgacgtggtggtgatggatccgccgcgc
aagggttgtgacaaggccgtgctgcagaccctggtggccatggcgccgcgccggctggtc
tatgtctcctgcaacccgcagaccctggcccgcgatctcgcctggctggtcaagcagggt
ttcgtactggacgaggtgcagccggtcgacatgttcccgcactccatgcacgtggaggcg
gttgcccgcctgagtttgccggccaaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system