KEGG   Azospirillum humicireducens: A6A40_09135
Entry
A6A40_09135       CDS       T04409                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ahu  Azospirillum humicireducens
Pathway
ahu03030  DNA replication
ahu03430  Mismatch repair
ahu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A6A40_09135
   03430 Mismatch repair
    A6A40_09135
   03440 Homologous recombination
    A6A40_09135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahu03032]
    A6A40_09135
   03400 DNA repair and recombination proteins [BR:ahu03400]
    A6A40_09135
Enzymes [BR:ahu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A6A40_09135
DNA replication proteins [BR:ahu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A6A40_09135
DNA repair and recombination proteins [BR:ahu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A6A40_09135
SSDB
Motif
Pfam: RNase_T PAS RNase_H_2 Rv2179c-like DNA_pol_A_exo1 DEDDh_C PAS_4 PAS_8 PAS_9
Other DBs
NCBI-ProteinID: ANC92055
UniProt: A0A160JGF7
Position
1969231..1971444
AA seq 737 aa
MTAPKTTAATAPSPRRIVPLAFRAAGLGLVALSVGLAMAVRGSDAADPLLTYAVAMTAAC
AAAVWGLWLAVDRYLLRAAETLSREAGLIAHGNAEGAVGGRVPLARYGDLLPIARAVNDL
SDKLAQVRRDIARTVADSTAKAEEQKTQLAAVLRDLHEGVLVCNTRHQILLYNQTALDIL
HLTGELGLGRSMLHFVVAEPLTHTLERLSLRVREGRHVNHEHGTTAQFVGATTDGRILLE
GRMSAILQEPEPGSDEPPAITGYVLTLSDATSELAALGQRDALLREATEGFRAPIANLRA
AVETLYDAPDLGPRDRAAFESAMLDSCDSLSRRLEQVTAAYRSVVTGSWPMSDIHSNNLI
GLVAHRVGSASSVTVTLTGLPQWVHGDSHGLVLLFAYLIEKVHGLTGAAAFDLEAAGPQD
GDRWVYLDLVWEGPAVPSATLDGWLDRTLPGGLGGLSAGDVLQHHRSTAWSEPLPSADGG
ADGGADGAAKRARLRVPLPPAQSPRSAQPRPRASARPEFFDFGLLHQPLATSELGRTPLD
RLHYVVFDTETTGLSPSTGDEIIQIAAVRVVGGRILTGETFNTLVDPKRPIPPESVPFHG
ITDGMVTGKPTIDAVLPQFRGFVSGAVLVAHNAAFDLKFLKMKERAAGVTFDCPVLDTML
LSRMLLGNDGDHTLDGIAERLGIEVVDRHTALGDSLVTAAVFLRMIEMLRDRDVRTLDDA
IRGANILVELAARERAF
NT seq 2214 nt   +upstreamnt  +downstreamnt
gtgacagcgcccaagaccacagccgcgacagccccttcgccccggcggatcgtcccgctg
gccttccgcgccgccggcttgggtctggtggcactgtcggtcggacttgcgatggcggtg
cgcggatcggacgcggcggatccgctgctgacctatgccgtggcgatgacggccgcctgc
gcggcggcggtgtgggggctgtggctggcggtcgaccgctacctgctgcgcgccgccgaa
acgctgagccgcgaggccgggctgatcgcccacggcaatgcggagggcgcggttggcgga
cgggtgccgctggcgcgctacggcgacctgctgccgatcgcccgcgcggtcaacgacctc
tcggacaagctggcccaggtccgccgcgacatcgcccgcaccgtcgcggactcgaccgcc
aaggcggaggagcagaagacccagctcgccgcggtgctgcgggatctgcatgaaggcgtc
ctggtctgcaacacccggcaccagatcctgctctacaaccagaccgccctcgacatcctg
catctgacgggggaactggggctgggccgctccatgctgcatttcgtggtggcggagccg
ctgacccacacgctggaacggctctccttgcgcgtgcgcgaaggccggcacgtcaatcac
gagcacggcaccaccgctcagttcgtcggcgccaccaccgacggccgcatcctgctggaa
ggccggatgagcgccatcctgcaggagccggaaccgggatcggacgagccgccggccatc
accggatatgtgctgaccctgtccgacgccaccagcgagctggctgcgctgggccagcgc
gacgccctgctgcgcgaggcgaccgaggggttccgcgcgccgatcgccaatctgcgcgcc
gccgtggaaaccctgtacgacgcgccggacctcggtccccgcgaccgtgcggccttcgaa
agtgcgatgctggactcctgcgacagcctgtcacggcgactggagcaggtgaccgccgcc
taccgcagcgtcgtcaccggcagctggccgatgagcgacatccattccaacaacctgatc
ggcctcgtggcccaccgggtggggagcgcgtcctccgtcaccgtcacgctgaccggcctg
ccgcaatgggtgcatggcgacagccacgggctggtcctgctgttcgcctatctgatcgag
aaggtgcatggcctgaccggagccgccgccttcgacctggaagccgccgggccgcaggac
ggcgaccgctgggtctatctggatctggtgtgggaagggccggccgtgcccagcgccacg
ctggacggttggctggaccggacgctgccgggcgggctcgggggcttgagcgccggcgac
gtgctgcagcaccaccgcagcaccgcctggagcgagccgctgccgtccgccgacggcggc
gccgatgggggcgccgatggcgctgccaagcgggcgcggctgcgcgtgccgctgccgccg
gctcagtcgccgcgctcggcccagccgcggccgcgggccagcgcccggccggaattcttc
gatttcgggctgctgcaccagccgctggcgaccagcgaactcggccgcacgccactcgac
cgcctgcattacgtggtgttcgacaccgagaccaccggcctgtcgcccagcaccggcgac
gagatcatccagatcgccgccgtgcgcgtcgtcggcgggcgcatcctgacgggggagacc
ttcaacacgctggtcgaccccaagcggccgatcccgccggagtcggtccccttccacggc
atcaccgacggcatggtgaccggcaagccgaccatcgacgccgtgctgccgcagttccgc
ggcttcgtctccggtgcggtgctggtggcgcacaacgccgctttcgacctgaaattcctg
aagatgaaggaacgggcggcgggcgtgaccttcgattgtccggtgctggacaccatgctg
ctgtcgcgcatgctgctgggcaatgacggcgaccacacgctggacggcatcgccgagcgg
ctgggcatcgaggtggtcgaccgccacaccgcgctgggcgacagcctggtcaccgccgcg
gtcttcctgcggatgatcgagatgctgcgcgaccgcgacgtgcggacgttggacgacgcc
atccgcggcgccaacatcctggtcgaactcgccgcaagggaacgcgccttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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