KEGG   Austrofundulus limnaeus (annual killifish): 106524097
Entry
106524097         CDS       T06063                                 
Symbol
lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106524097 (lnx1)
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106524097 (lnx1)
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    106524097 (lnx1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 zf-P11 zf-RING_4 Prok-RING_4 U-box zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 106524097
NCBI-ProteinID: XP_013873209
UniProt: A0A2I4BZS5
Position
Unknown
AA seq 765 aa
MAEASPTPLSPSQNEDSSSPPDLCASCGHPHKLEENHEYMYQDEVDDDLVCHICLQPLIK
PLDTPCGHTYCQECLTSFLLESDFCPVCRTPLMLQSCRRPSLLVHKLLDKLIVACPFVEH
CTETLLRGEVEDHIKSRCKGASHYGLSADRKRRSQEGECTDSTSELNIATMPNDSPTSAA
VALLSDEPGLVNPAFDPSMEDNSRSGSMTSLAARSSTKKIRNFDRSSVRSRSFRRLNRAF
SVLRRTKSGTAVSNETSEERDNARNSSVPREMLALPQLHHLIPDGEVTSIKITRQDPSDP
LAISVVGGNETPLVRILIQDIYREGIIARDGRLLPGDMILKVNGIDISNVPHSSAVATLR
QPCQLLRLTVLREQRYRYRSHAHGFPYSHGHDAAGGHQSHGLSQPLRDDSVHVVLNKSTP
DEQLGIKLVRRAEEHGVYIFHLLEGGLAARDGQLCIGDRVLAINGHDLRYGAPEHAALLI
QASEQRVHFVVSRQICLPNPDVLQEAPWGMEGPPPYSPVDMEQTLLDSCQKPACYEKTVT
LTKEPYDSLGMTVAGGMSSRGWDLPIYVTNVDPDGVVGQEGSIXKGDVLLNVNGVDLTGV
TRGEAVANLKNTSSPVVLKVLEMRPPDEKSPECSLPPCLTSSPTDSTKSPLPNDDYSPQW
VSWLQLPRHLYYRKDIVLRRNTSGSLGFSIVGGQEEVNCNQSFFIRSIVEGTPAYNDGRI
RCGDILLEVNGKSTWGMTHTALVRLLKELRGKITLTIVSWPGSLL
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggctgaagcttctcctacaccgctctcaccttcacaaaacgaagactcttcctcgccc
cctgacctctgcgcatcatgtggccaccctcacaaactggaggaaaaccacgagtacatg
taccaggatgaggtcgatgatgacctcgtgtgccacatctgtctgcagccgctcataaag
cccctggacacaccctgcggtcacacctactgccaggagtgtctgaccagcttcctcctg
gagagcgacttctgccctgtgtgccgcacgcccctcatgctgcagagctgcaggaggccc
agcctgctggtgcacaagctgctcgacaagctgatcgtagcctgtcctttcgttgagcat
tgcacagaaacactgcttcgtggtgaggtggaggaccacatcaagagcaggtgtaaagga
gcctcccactatgggctctcagcagacaggaagcgacgctcacaggagggcgagtgcact
gacagcacatcagagcttaatatcgccaccatgcctaatgacagccccacctccgctgct
gtggctctcctgtcagacgagcctggcctggtcaacccagcttttgaccccagcatggag
gacaacagtcggtcaggcagtatgaccagcttggccgctcgcagcagcaccaagaagatc
agaaatttcgaccggtcttctgtgaggagccgctccttcaggagactgaatcgagccttc
agtgttctacggaggaccaagagtggcaccgcagtcagcaatgagacatctgaggagagg
gataatgccagaaactccagtgtgccacgggaaatgcttgcactccctcagctgcatcac
ctgatccctgatggtgaagttaccagtattaaaatcacacgacaggatccttcagatcca
ctggccatcagtgttgtgggtggcaatgagacccctctggtccgcatcctcatccaagat
atctacagagagggcatcatagctcgggatggccgcttgttgcctggggacatgattcta
aaggtgaatggcattgatatcagcaacgtgccccactcctctgcagtggcaactctgagg
cagccctgccaactgctgcggctaaccgtgctgcgagagcaacgctaccgctaccgctca
cacgcccatggcttcccatacagccacgggcacgatgccgccgggggccaccagtcccac
ggcctttcccaacccctgagagacgacagtgtccacgtggtcctgaataaaagcactcca
gacgagcagctgggcatcaagcttgtgcggagggcggaggagcacggggtctatattttt
cacttgctggaggggggcctggcggcacgcgatggacagttgtgtatcggtgatcgcgtg
ctggccatcaacgggcatgaccttcgttatggggcaccagagcacgctgctttgctcatt
caggcaagtgagcagcgcgttcacttcgtagtgtctcgtcagatttgcctgcccaaccca
gacgtcttacaagaagctccgtggggcatggaaggtccaccgccatattctcctgtggac
atggagcagactctgctggactcatgtcagaagcctgcgtgctatgagaagacagtcacg
ctcaccaaagagccgtatgactccctgggcatgacggttgcggggggtatgtccagccga
gggtgggaccttcccatctatgtcacgaacgtggaccctgacggagtggtgggtcaagag
ggctccattrgcaaaggtgacgttttgctgaacgtaaacggggtggatttgacgggggtg
actcggggtgaggccgtggccaacttgaagaacacctcatctcctgttgtgctcaaggtc
ctggagatgcgacctcctgatgagaaatctccggagtgctcattgccgccctgtctcacc
tcatcccccacagacagcactaagagcccactgcctaatgatgactactccccacagtgg
gtgtcatggctgcagctacccagacatttgtactaccgcaaagacattgtgttgcgacga
aacacttcaggaagcctgggcttcagtattgttgggggccaggaggaagtcaactgcaat
caatccttttttattcgttccatcgtggaggggacaccagcctacaatgatggcaggata
agatgtggggacatcctgcttgaagtgaacgggaagagcacatggggtatgacacacacg
gctttggttcgactcctgaaggagcttcggggaaagatcaccctgaccatcgtctcttgg
ccaggcagcctgctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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