KEGG   Arabidopsis lyrata (lyrate rockcress): 9310350
Entry
9310350           CDS       T01578                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
  KO
K03253  translation initiation factor 3 subunit B
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9310350
   03012 Translation factors [BR:aly03012]
    9310350
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     9310350
Translation factors [BR:aly03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    9310350
SSDB
Motif
Pfam: eIF2A RRM_1 ANAPC4_WD40 IKI3
Other DBs
NCBI-GeneID: 9310350
NCBI-ProteinID: XP_020877842
Position
Unknown
AA seq 714 aa
MAAVVDIDALSAQLGVNWSEVNLDSIQLPPGNNFGIESDDEAVYHDDQSEFDTGFGNIIV
VDHLPVVPKEKFEKLEGVLKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQ
NAKEKSHGYKLDKTHIFAVNMFDDFDRLMNVREEWEPPQARPYVPGENLQKWLTDEKARD
QLVIRSGPDTEVYWNDARQKKPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGAD
TFTRLMRYQHSMVKLVDFSPGERYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKG
SADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN
VVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGE
YLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIH
GDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFF
NVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGNLVYRILKDHF
FQLAWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRRALKEEWEK
WVMQWKSLHEEEKLERQDLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQESM
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcggcggtagttgatattgatgccctatcggctcagttaggggttaattggtctgag
gttaatctcgattcaatccaacttcctcctggaaacaactttgggatcgagagtgatgat
gaagctgtataccatgatgatcagtcagaattcgacactggatttggtaacattatcgtt
gttgatcacctccctgttgttcccaaggagaagtttgagaaactagaaggtgttctcaag
aaaatttataaccagttaggtgtgattaaggaaaatggactgtggatgcctgttgatccc
gatacgaagatgacattgggctactgttttattgagttcaatactcctcaggaagcacaa
aatgctaaggaaaagtcgcatggctacaagttggacaagactcacatctttgctgttaac
atgtttgatgatttcgataggttgatgaatgtgagggaggagtgggagcctcctcaggcc
aggccttatgtccctggggaaaatttgcagaagtggcttaccgatgaaaaagcccgggac
cagctagtcattcgttcaggccctgatactgaagtttactggaatgatgccaggcagaag
aagcctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctcct
ttaggtacataccttgtgacacttcacaagcagggggcagctgtttggggtggtgctgat
acattcacgcgtctcatgcgttatcagcattctatggtcaaactagttgatttctcgcca
ggtgagagatatcttgtaacttaccatagccaagaaccaagcaatccgagagatgcaagt
aaagtagagattaaggtctttgatgtgagaaccgggaggatgatgagagatttcaagggt
agtgctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgtt
ttcagatgggctggtggaaaagatgataaatactttgccaagcttagcaaaaacaccatc
tctgtctatgagactgagactttcagcctaatagacaagaaatccatgaaggttgataat
gttgtggatatttgctggtctcccactgattccatcctttcattgtttgttcctgaacaa
ggtggtggaaaccaacctgccaaggttgctctagtccaaatcccgagcaaggtggagctg
aggcagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagag
tatcttgctgttaaggttgatcgatacacaaaaactaagaagagcacatactctggattt
gagcttttccgtatcaaagaaagggatattcccatcgaggttcttgagctggataacaag
aacgacaagatcattgctttcgcttgggagcccaagggtcacaggtttgctgtgattcat
ggtgaccaaccaagaccagatgtcagtttctactcgatgaagaccgcacaaaatactgga
agggtttcaaagctcgcaacgttgaaggccaaacaagccaatgccctcttctggtcgccc
acaggaaagtacatcattcttgctgggttaaaaggtttcaatggccagcttgaatttttc
aacgtggatgagctcgagacaatggccacagctgaacacttcatggccacggatatcgaa
tgggacccaactggaaggtacgttgcaaccgcagtgacatcagtccacgagatggagaat
gggttcaccatatggtctttcaacgggaatttggtttaccggatactgaaggatcatttc
ttccagttggcttggcgtccaagaccgccatcattcttaactgcagagaaggaagaagag
atagcaaagaacctgaagaagtacagcaagaagtatgaggcagaggatcaggacgtgtcg
ttgctgttgagtgaacaagacagagagaagagaagggcattgaaggaagaatgggagaaa
tgggtgatgcagtggaagtctctgcatgaagaggagaaactcgagaggcaagatcttcga
gatggtgaagttagtgatgtggaagaagatgaatatgaagccaaggaagttgagtttgag
gatcttattgatgtcactgaggaaatcgttcaagagtcgatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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