KEGG   Alteromonas macleodii ATCC 27126: MASE_00020
Entry
MASE_00020        CDS       T02246                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
amac  Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:amac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amac03032]
    MASE_00020
   03400 DNA repair and recombination proteins [BR:amac03400]
    MASE_00020
Enzymes [BR:amac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MASE_00020
DNA replication proteins [BR:amac03032]
 Prokaryotic type
  DNA Topoisomerases
   MASE_00020
DNA repair and recombination proteins [BR:amac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MASE_00020
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: AFS35581
Position
4421..6841
AA seq 806 aa
MSAENNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSE
ITVLIHSDGSVSVSDDGRGIPTELHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSSRLKLRIRRGGKAHEQEYHHGVPQAPLAVTGDTDKTGTMIRFWPSSDTFTD
TLYHYDILAKRLRELSFLNSGVSIRLKDERDGKEDHFMYEGGIKAFVEYLNEKKTPVHQK
VFHFSSEQEDGIAVEVAMQWNDSFQENVFCFTNNIPQRDGGTHLAGFRGALTRTLNNYME
KEGLNKKAKTNASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVRPAVESAMNEKLA
EFLLENPAESKIIAGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYDPEKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYVYIAQPPLYKVK
KGKQEQYLKDDDALTNYLTSIAIDGASLHTSDEDPGISGVGLENLVKQYQSVEKMIARMK
RLMPASILYRMLYTPTLNLEDLKDESALEHVAKHFVEQLTERENDGATYRYEIRTDAELS
EYYITIIMRMHGIDYEYIIDHEFIESSEYQRLKELNLAINDMMGKDAYIQRGERRQPVES
FKEALEWLMNEAKRGQYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIEDAIGCDQLFT
TLMGDQVEPRREFIEANALKVENLDV
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtcagcagagaacaactacgactcgtccagtattaaagtacttaaaggattagatgcc
gtaagaaagcgtcctggtatgtatatcggtgatactgatgatggtaccggattacaccac
atggttttcgaggtggtcgataactctatcgatgaagcacttgctggacattgttctgag
attactgtgctcattcacagcgatggctcagtatctgtgtctgacgatggacgtggtata
ccaactgaattgcacccagaagagggtgtgtctgcagctgaagttattatgacggttctt
cacgccggcggtaagttcgacgataactcttataaagtgtcgggcggtttgcacggtgta
ggtgtatcagtagtaaacgcactttcaagtcgactgaagcttcgtatccgtcgcggtggt
aaagcgcatgaacaagaatatcatcatggtgttccacaagcgccactagcggtaactggc
gatactgacaaaacgggaactatgatccgtttctggccaagttcagacaccttcacagat
acgctttaccactacgatattcttgctaaacgtcttcgtgaactatcatttttgaactct
ggtgtgtctattcgcttgaaagacgaacgcgatggaaaagaagaccacttcatgtacgaa
ggtggtatcaaagctttcgttgagtacctaaatgaaaagaaaacacctgttcaccagaaa
gtgtttcatttcagcagtgaacaagaagacggtattgcagtagaagtagcgatgcaatgg
aacgatagtttccaagagaacgtgttctgtttcaccaacaacattcctcagcgcgacggc
ggtactcacttggcgggcttccgtggagccttaacgcgtacattgaataactacatggaa
aaggaaggcctgaacaaaaaggcaaaaacgaatgccagtggtgacgatgcgcgtgaaggt
cttaccgcggttatttccgttaaagtaccagatccgaaattcagctcacagacaaaagat
aagcttgtatcttctgaagttcgtccagcagttgagtcggcaatgaacgaaaagctagca
gagtttttattagaaaaccctgcagaaagtaaaatcattgcgggtaaaattattgatgct
gctcgtgctcgtgaagctgcacgaaaggcccgtgaaatgacacgccgtaaaggtgcgcta
gatttggctggcctaccaggtaagctagctgactgtcaggaaaaagatcctgcacttagt
gaactatacatagtggagggtgactctgcgggcggttcagctaagcagggtcgtaaccgt
aaaaaccaagctattctgccgcttaaaggtaaaatcctaaacgttgagaaagcgcgcttt
gataagatgctttcttctcaggaagttgcgacgcttatcacggcactaggttgtggtatc
ggtcgtgacgagtatgaccctgaaaaattacgctatcacagcatcattatcatgaccgat
gctgacgtagatggttctcacattcgtacgcttctactcacatttttctatcgtcaaatg
cctgaaatcattgagcgtggatatgtatatattgcacagccaccgctatacaaagtgaag
aagggtaaacaagagcagtatcttaaagatgacgatgcgctaactaactacctaacatca
atcgcaattgacggtgcgtctttgcacaccagcgatgaagacccaggtattagtggtgta
ggccttgaaaaccttgttaagcagtaccaatcggtagagaagatgattgcacgtatgaaa
cgtcttatgcctgcatctatcctctacagaatgctttacacgcctacgctaaaccttgaa
gaccttaaagatgagtctgcactagagcatgtggcgaaacacttcgtagagcagcttaca
gagcgcgaaaatgatggtgctacataccgttatgaaattcgcactgatgctgaacttagc
gagtactacattacaatcattatgcgtatgcacggaattgattatgagtacattatcgat
catgagttcatcgagtcgtctgaataccagcgccttaaagagcttaaccttgccattaac
gacatgatgggcaaagacgcctatattcagcgtggcgagcgtagacagccagttgagtct
ttcaaagaagcactagagtggctaatgaacgaagcgaaacgcggccaatacattcagcgc
tataaagggctaggtgagatgaaccctgagcaactctgggaaaccaccatggacccagaa
agccgccgtatgcttcaagttaccattgaggatgccattggttgtgatcagctgttcact
acattgatgggtgaccaagttgagcctcgtagagagtttatcgaagctaatgcgcttaaa
gtggaaaacttagacgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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