KEGG   Alteromonas mediterranea UM4b: I636_13320
Entry
I636_13320        CDS       T02723                                 
Name
(GenBank) exonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
amad  Alteromonas mediterranea UM4b
Pathway
amad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    I636_13320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amad03400]
    I636_13320
Enzymes [BR:amad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     I636_13320
DNA repair and recombination proteins [BR:amad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     I636_13320
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AGQ02508
Position
3000140..3001504
AA seq 454 aa
MIFFMFTNSPSTSRQILTVTKLNRLARTALEGEIGLIWLSAEISNFVAAASGHWYFTLKD
NKAQVRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQA
FEALKFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYP
SMVQGEAAPLQLINALRKANQRSEVDVLLLTRGGGSLEDLWCFNDESLAREIAASTLPIV
SAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQANK
QQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQSP
AARVARAKDKLSYVNAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLTDS
TTVNNVSKVNVGDEIKTRVTDGEITSTVTNIQRQ
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgattttttttatgtttacaaattcgccatctacctctcgacaaattttaacagttact
aagctaaatcgcctcgccagaaccgcactagagggcgaaattggtcttatttggctatct
gcggaaatatcaaactttgtggccgccgcttcagggcattggtacttcaccctgaaagac
aataaagcgcaagttcgcgccgccatgtttaaaggcgctaatcgcaatgtacgccttcgc
ccaaaagaaggcgataaaattttagtgcgcgcttcggtaggactatatgaagcccgcggt
gactatcaacttgttgttgagcacatggaaagcgacggtgaaggtgcgcttaagcaagcg
tttgaagcattaaaattcaagcttaataatgaagggctatttgatgcaacgaataagcgg
ccactgcctgaacgtataaatcgcattggagtgatcacttcatcaagcggcgcagcgctt
cacgatgtcttaagcgtattgaaacgcagaagcccgcaaactgaggttattgtttaccca
tctatggtacagggtgaagccgcaccgcttcagctaattaatgcgctgcgtaaagctaac
caacgttcagaggtcgacgtgcttctactcaccagaggcggaggctcgctggaagattta
tggtgctttaacgatgaaagcttggccagagaaatagccgccagtacccttcccatcgtg
agcgccgttggccacgaagtagactttaccattagcgactttgtggctgatgtacgctct
cccaccccatctgctgcggcagaaattttaagtcaagactctacagcgctctatcaaacc
ataaaccagcagaagcagcgtttggcccgcgcgatgaaccattgtattcaggcgaataag
caacaactgacccttaaaaagcagcgcttagatgctctgcacccgcaaagtcgtatacag
tctcagtggcaaaccctagacaggttgcagctgcgcttagtacacgcaatgcaacgggat
atgtccacggcggaaaagcgcgttcatgcgcttaactatcgattaaatcaacaatcgcct
gcggcgcgtgtagcccgagcgaaagacaaacttagttacgtaaacgctaagttgatcgct
actatgactgccttgctcaaaaacaagaaaagtgaactcggtggttctgtaacactctta
caatctgtaagcccgctctctacgttggctcgaggctacagcattacccttactgatagc
actacggttaataacgttagcaaggttaatgtaggcgatgagataaaaacacgagtgact
gatggcgaaataaccagtacagtgacaaatattcaacggcaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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