KEGG   Amycolatopsis mediterranei U32: AMED_7082
Entry
AMED_7082         CDS       T01269                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
amd  Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:amd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amd03019]
    AMED_7082
   03009 Ribosome biogenesis [BR:amd03009]
    AMED_7082
Messenger RNA biogenesis [BR:amd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AMED_7082
Ribosome biogenesis [BR:amd03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AMED_7082
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ADJ48800
UniProt: A0A0H3DD02
Position
7827075..7827650
AA seq 191 aa
MTGLDLGKEALIEIAALVTDAELNVLGDGVDIVIHADEEKLAGMPEIVREMHAHSGLTEE
VRRSTVTLEEAERRVLDYIREHVPEPGTAPLAGNSIATDRGFIARDMPALDAHLHYRMVD
VSSVKELVRRWYPRIYYAKPEKGLAHRALADIRESIGELDYYRRVAFVPQPGPTSEEAKA
AAAEVQEQHQR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgacggggctcgacctcggcaaagaagcgttgatcgaaatcgccgccctcgtcaccgac
gcagaactgaacgtgctcggcgacggagtcgacatcgtcatccacgccgacgaggaaaaa
ctcgccgggatgcccgaaatcgtccgcgagatgcacgcccactccggcctcaccgaagaa
gtccgccgctccacggtgaccctcgaagaagccgaacgccgcgtcctcgactacatccgc
gagcacgtccccgaaccgggcaccgcgcccctcgccggcaactccatcgccaccgaccgc
ggcttcatcgcccgcgacatgccggccctcgacgcccacctgcactaccgcatggtcgac
gtctcctccgtcaaggaactcgtccgccgctggtacccgcgcatctactacgccaagccc
gagaagggcctcgcccaccgcgccctcgccgacatccgcgaatccatcggcgaactcgac
tactaccggcgcgtcgccttcgtcccccaacccggccccaccagcgaagaagccaaggcc
gccgccgctgaagtgcaggaacagcaccaaaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system