KEGG   Apis mellifera (honey bee): 409857
Entry
409857            CDS       T01057                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    409857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ame03009]
    409857
Enzymes [BR:ame01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     409857
Ribosome biogenesis [BR:ame03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    409857
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 409857
NCBI-ProteinID: XP_393347
BEEBASE: GB49192
UniProt: A0A7M7R5T6
Position
LG3:11057227..11058679
AA seq 234 aa
MGQKRKNRKEDFEYDPAPKHLHIAHIKNQEKRLIVILEKAQLESVKVGNSFELLNCDDHI
NILKKNNKDPGTCRPDIAHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTF
KRFAGLMVQLLHKFNVRASDGPMKLLKVIKNPITDHLPVGCRKIAMSFNANKIQNPRELV
PPDEPIAIIVGAMAHGQVKPDYIEDTISISNYPLSGALTCSKLCTAFEEVWKII
NT seq 705 nt   +upstreamnt  +downstreamnt
atggggcaaaaacgtaagaatcgaaaagaagattttgaatatgatccagctccgaaacat
cttcatatcgctcatattaaaaatcaagagaaacgtttaattgttatattagaaaaagct
caattagaatccgttaaggttggaaatagttttgaattattaaattgtgatgatcacatt
aatatattaaaaaaaaataataaagatcctggcacatgtcgaccagatattgctcatcaa
tgtctactaatgttaatggatagtccattaaatagagctggactattacaagtttatata
catacagaaaaaaatgtattaatagaaataaatccacaaaccaggataccaagaacattt
aaacgttttgctggccttatggtacaattattacataaatttaatgttcgtgcatctgat
ggtccaatgaaattgttaaaagtaattaaaaatccaattactgatcatttacctgttggg
tgtcgtaaaattgcaatgtcatttaatgcaaataaaatacaaaatccacgagaattagtt
cctcctgatgaaccaattgctattatagtaggtgcaatggcacatggacaggtaaaacca
gattatatagaagatactatatctataagtaattatcctttatctggtgctttaacatgt
agtaaattatgcacagcattcgaagaagtgtggaaaataatataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (41)   

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