KEGG   Apis mellifera (honey bee): 551033
Entry
551033            CDS       T01057                                 
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    551033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ame03019]
    551033
Enzymes [BR:ame01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     551033
Messenger RNA biogenesis [BR:ame03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     551033
SSDB
Motif
Pfam: CAF1 DNA_pol_A_exo1 RNA_bind DUF1866
Other DBs
NCBI-GeneID: 551033
NCBI-ProteinID: XP_016770929
BEEBASE: GB49318
UniProt: A0A7M7IKY7
Position
LG12:complement(8275813..8367051)
AA seq 535 aa
MNEVLKTNFKTLYPKLEIAVNNATFIAIDAEFTGLYSEEKLKHSFFDSFNDRYKLLKKNI
QQFMIIQFGIATFRHVPYENTYKVDCFNFYLFPKSIPLKNRHLIWQVAALEFLCKHNFEF
NKFLKEGISFLDETDEKLLKNYIKEDSLAYNLNHLTYEEENEFINYKTKISEWIANKSGE
TLKVETSNPILQYLIHKDIRHNYKNVWSISDDKSVNIIEISPNMHEFIRENDKETLEKEL
LDYYIGFSIVFKLLASSKKIIVGHNILLDLMFMHQQFYKPLPNSYNEFKKNIHELFPQIY
DTKFLSYEVRKLFSKEEVSWKISSLSTLYEYFTTKGKLLTLNSPKIAMNNEESSNSDIIL
DEKKYHTAGWDAYFAGYIYIKMAHIFCVNKFGIGLEERIATHAELISSIKNFVNCINITR
GNEMYMKFDGPDPMLSRPEWLHVKLKSPSVDIKQLMEKFSSFGQVDVMPFAQRRVLVAVA
NHKSALHILRHFNTSEEFQVARYSRIRHATPISICLWSGVILSGSLFAWMLKKCF
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgaatgaagttttaaaaacgaattttaaaactttgtatccaaagttggaaatcgctgta
aacaatgcaacttttattgccatcgatgctgaatttactggtttatattcagaagagaaa
ttgaaacatagctttttcgattcgttcaatgatcgttataaattattaaagaaaaatatt
cagcaatttatgataatacaatttggcattgcaactttccgtcatgttccttatgaaaat
acctataaagtagattgttttaatttttatttgtttccaaaatctataccattaaaaaat
agacacttaatatggcaagtggcagcattagagttcctttgtaaacataattttgaattt
aataaatttttaaaggaaggtatttcattcttggatgagacagatgaaaagttattaaag
aattatataaaagaagatagtttagcgtataatttaaatcatttaacatatgaagaagaa
aatgagttcataaattataaaactaaaatttctgaatggattgctaacaagagtggagaa
acattaaaggtggaaacttctaatcctatattacaatatttgatacataaagatataaga
cacaattataaaaatgtatggagtatatcggatgataaatcagtaaatattattgaaata
tcacctaacatgcatgaattcataagggaaaatgataaagaaactttggagaaagaatta
ttagattattacataggattttctatagtatttaaactcttggcctcttctaaaaaaata
atagtaggacataatatacttttagatttaatgtttatgcatcaacaattttataaacca
ctgccaaattcatataatgaattcaaaaaaaatatacatgaattatttccacaaatatat
gacacaaaatttttaagttacgaagtacgaaaattatttagcaaggaagaagtgagttgg
aaaataagttcattgagtactttatacgaatattttacaactaaaggaaaattattaacc
ttgaattcaccaaagattgcaatgaataatgaagaatcttcaaactcagatattatccta
gatgaaaaaaagtatcacactgctggatgggatgcttactttgctggatatatatatata
aaaatggcacatatattttgtgtaaataaatttggaataggtttggaagaaaggatagca
acgcatgctgaactaataagcagcataaaaaactttgtaaattgtataaatataacaaga
ggcaatgaaatgtatatgaaatttgatggtccagatccaatgttatcaagaccggaatgg
cttcatgtgaagttaaaatcaccatctgtagatatcaaacagttgatggagaagttttca
tctttcggccaagtggatgtgatgccttttgctcaaagacgtgttttggtagctgtagca
aaccataaaagcgcgttacacatattgcggcatttcaataccagcgaggaatttcaggtg
gcacggtatagtcgcataaggcacgcgacacccatcagcatctgtttgtggagcggagtc
atcttgtccggaagtttatttgcctggatgttgaaaaaatgtttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (68)   

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