KEGG   Aeromonas media: B224_3888
Entry
B224_3888         CDS       T03075                                 
Name
(GenBank) Holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
amed  Aeromonas media
Pathway
amed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B224_3888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amed03400]
    B224_3888
Enzymes [BR:amed01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     B224_3888
DNA repair and recombination proteins [BR:amed03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B224_3888
    RecFOR pathway proteins
     B224_3888
SSDB
Motif
Pfam: RuvC DUF3882
Other DBs
NCBI-ProteinID: AHX62078
Position
complement(3061105..3061626)
AA seq 173 aa
MSIILGIDPGSRITGYGVIRIVAGKAEYLGSGCIRTDLGELPSRLKQVYDGVSEIITQFK
PDEFAIERVFMARNADSALKLGQARGSAIVAAVNALLPVSEYSATQIKQAVVGTGGAAKE
QVQHMVTHLLKLSATPQADAADALGVALCHFHTRQSLIRMAGRATSSVRGRYR
NT seq 522 nt   +upstreamnt  +downstreamnt
atgagcattattctgggcatagaccccggctcccggatcactggctacggcgtcatccgc
atcgtcgcgggcaaggcggaatacctgggctcgggctgcatccgcaccgacttgggcgag
ctgccgtcccgcctcaagcaggtgtatgacggggtgagcgagatcatcacccagttcaag
ccggacgagttcgccatcgagcgggtcttcatggcgcgcaatgcggattcggccctgaaa
ctcggccaggccaggggcagcgccatcgtcgcggcggtcaacgccttgctgccggtgagc
gaatactcggcgacccagatcaagcaggcggtggtgggcacgggcggcgccgccaaggag
caggtgcagcatatggtgacccatctgctcaagctgtcggccaccccccaggcggatgcg
gcggatgccctcggggtggcgctctgtcacttccacacccgccagagtcttatcaggatg
gcgggacgagccaccagttcggtacgtggtcgctatcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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