KEGG   Astyanax mexicanus (Mexican tetra): 103024987
Entry
103024987         CDS       T05042                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
  KO
K05210  glutamate receptor ionotropic, NMDA 2B
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04020  Calcium signaling pathway
amex04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    103024987
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    103024987
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amex04040]
    103024987
Ion channels [BR:amex04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   103024987
SSDB
Motif
Pfam: NMDAR2_C Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 103024987
NCBI-ProteinID: XP_022530406
Position
12:10724005..10805579
AA seq 1576 aa
MFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNRIRSTIENSFVGWELEE
VILLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEAATIFEVAHSVGLTGYGYTWIVPAL
VAGDADNVPNVFPTGLISVSYDEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGC
LGAPDKKGTKGGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLDKERQWDRVGK
WENGSLTMKYHVWPRFELYSDAEEREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPC
RKQLKTQNQTGDSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKINGTWNG
MVGEVVFKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSA
DVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNN
SVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQRPND
FSPPFRFGTVPNGSTERNIRNNYKEMHSYMTSFHQKNVNEALHSLKTGKLDAFIYDAAVL
NYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALW
LTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSG
KPGVTFSISRGIYSCIHGVQIEENKSGLNSPSATMNMNMNNTHSNILRLLRTAKNMTSVP
GVNGSPHSALDYGHRESAVYDISEHRRSLVGHTDCKPPPPYLPEDNMFSDYVSDVERTFG
NMHLKDSNLYQDHYLHHHGGTGSALALGMSGPLPNRPRSLGSASSLEGGMYDCDSLGGGV
APIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSGLPDLYGKFSFKGGASSSGFIAGHDR
YCGGGGAGSGGDDGNIRSDVSDISTHTVTYGNLEGNAKRRKQYRDSLKKRPASAKSRREQ
DEIELGFRRRTHHTIHHHHHHNHPVTQGHRSATPPVERKSQRGANSSSYVFRDKENLRDF
YMDQFRSKEGASPWEHLDLSDAPGMGGGGGLGGGGCGGVVSSGGGGGACTSLVPVDDFLK
GKSKKTECKGGVGGGGSPGQQGHACWEKSIGGVGGLAGGDWECRNCHSGGGGGGKQVCMH
GGGGGGGYSAAGGVGGSGGGGGGGSGQVSSRPSSATCKRCDSCKKPGNLYDISEDNHLLL
DQLGGKFVLEGGKGGGGGGGGGGGGAQTQAQRRKFGPGGRVLRRQHSYDTFVDLQKEGAG
RMGGSGFGGGGASMLPPPRSVSLKDKDRYMEGASPYAQMFERYAGGERETGFFAGGDRGK
GGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGGMGGTRGVGTYSLSKSLYPDKVN
QNPFIPTFGDDQCLLHGAKSYYVKKQQTQPQQQQTQQQQQQQQLLNNNRADFRGSMGVTS
YLPASASAGVMSNVGPRFPKELCLGGPLGNHHGGAAGNNKLLSARDGLGMGQGQRPFNGS
SNGHVYEKLSSIESDV
NT seq 4731 nt   +upstreamnt  +downstreamnt
atgttcttccagttcgggccgtcgatagagcagcaggcctccgtcatgctcaacataatg
gaggagtacgactggtacatcttctccatcgtcaccacctactaccccggataccaagac
ttcgtcaacaggatccggagtaccattgagaacagttttgtgggctgggagttggaggag
gtgatactgctggacatgtcggtggacgacggcgattccaagattcagaaccagctgaag
aagctccagagccctgtcattctgctctactgcactaaagaagaggccgccactatcttc
gaggtggcgcattctgtgggtctcactggatacggttacacgtggatcgtaccagcgctg
gtggcgggggacgcggacaacgtcccaaatgtttttcctacaggtctgatctcagtgtcg
tatgatgagtgggattatgggctggaggcccgggtgcgtgatgctgtggccatcatagcc
atggcaacctccaccatgatgctggaccgaggtcctcacacgctgcttaagtcaggctgc
ctcggcgcgcctgacaagaaaggcaccaagggaggaaaccccaatgaagtgctgagatac
ctcatgaacgtgacctttgaggggcgcaatctctcttttagtgaggacggataccagatg
caccccaagctggttattattttgctggataaggaaagacagtgggacagggtgggtaaa
tgggagaacggctctctgacgatgaagtaccacgtatggccgcgcttcgagctctattca
gacgccgaggagagagaagacgaccacctgtctatagtaactctggaggaggccccgttc
gtcatcgtggaggacgtggaccccctcagcggcacctgcatgaggaacacggtgccctgc
aggaagcagctcaaaactcaaaaccaaacaggagattcagggatctacatcaagcgctgc
tgcaagggtttctgcatagacatcctcaaaaagattgccaagaccgtcaagttcacctac
gacctctacctggtgaccaacggcaagcacggcaagaagatcaacggcacgtggaacggc
atggtcggagaggtggtgtttaagaatgcccacatggcagtgggctctctgaccatcaat
gaggagaggtcagaggtcatcgacttctccgtgcccttcatagagacgggtattagtgtc
atggtctcccgtagcaacggcacagtgtccccctcggcatttctagagccctttagtgct
gatgtctgggtgatgatgttcgtgatgctgctgattgtgtctgccgtcgctgtctttgtc
tttgagtacttcagtcctgtcggatataaccgctgtctggcagacggtcgagaacctggt
gggccctccttcactattggcaaggccatatggctgctctggggtctggtcttcaacaac
tctgtgcctgtccagaaccctaaggggaccaccagtaagatcatggtctccgtatgggcc
ttcttcgctgtcatcttcctggccagctacacagctaacctggccgccttcatgatccag
gaggagtacgtggaccaggtgaccggcctcagcgacaaaaagttccagcgtccaaatgac
ttttctcctccgttccgctttggcacggttcccaatggcagcacagagaggaacatcagg
aacaactataaagagatgcacagctacatgaccagcttccaccagaaaaacgtaaacgag
gccctccacagcctgaagactggtaaactggacgcgtttatctatgacgccgctgtgctg
aattacatggccggcagagacgagggctgcaaactcgtgaccatcggtagtggatacatc
tttgctaccacaggctacggcatcgccatccaaaaagactcaggctggaagagggcggtg
gatctcgccattctgcagctgttcggagatggtgagatggaggagctggaggctctgtgg
ctgactgggatctgtcacaacgagaagaacgaggtgatgagcagccagctggacgtggac
aacatggccggcgtcttctacatgctgggggcggccatggcgctgtcgctcatcaccttc
atcgccgagcacctgttctactggcagctacgcttctgcttcatgggcgtgtgctcgggc
aagccgggcgtcaccttctccatcagcaggggcatctacagctgcatccatggtgttcag
atcgaggagaacaaatcaggcctcaactccccatcagccaccatgaacatgaacatgaac
aacacacattcgaacatccttcgtctgctacgcactgccaaaaacatgacctctgtgcct
ggtgtcaatggctctccccacagcgccctggattacggccaccgcgagtcagctgtctac
gacatcagcgagcatcggcgaagcctggtaggccacacggactgcaagcctccgccaccg
tacttgcctgaagacaatatgttcagcgactatgtgagcgatgtggagaggacttttggg
aacatgcacctgaaggacagtaacctgtaccaggatcattacctgcaccaccacgggggc
acgggatccgcactggctctgggtatgtcgggtccgttgcctaaccgacctcgtagctta
gggagtgccagttcgttggagggtgggatgtacgattgtgacagcttagggggaggggta
gcgcccatctttaccacccagcctcgccagtcactgacgcacaggaacagggaaaagttt
gacctgatcgcaggccaccccacccagtccagcttcaagtctggcctgcctgatctgtac
gggaaattctccttcaagggtggggcatccagttcagggtttatagcgggacatgacagg
tactgcgggggaggtggggcgggctcgggaggggacgacggcaatattcgctcggacgtg
tcggatatttccacccacaccgtgacctacggcaatcttgaaggcaatgccaagaggcgc
aagcagtacagggacagccttaaaaagaggccagcatctgccaagtcccgtcgggagcag
gacgaaattgaactgggcttccggaggcgcacccaccacaccatccaccaccaccatcat
cacaaccatccagtcacacagggacaccgttcagccaccccacctgtggaacgcaagagc
cagagaggggccaatagctcctcatatgtgttccgtgacaaagagaacttgagggacttc
tacatggaccagttccgatccaaggaaggggcatccccatgggaacatttggatttgagt
gacgctcctggaatgggcggcggagggggtctgggtgggggtggatgtggtggcgtagtc
agcagcggtggtggagggggagcttgcactagtttggttcctgtggacgatttcttgaaa
ggtaaatccaagaagacagagtgtaagggtggagtgggaggaggaggatctcctgggcag
cagggccatgcatgctgggaaaagagcattggaggggtgggggggttggccggtggggac
tgggaatgccgtaactgccacagtggaggaggtggaggtggcaagcaagtttgcatgcat
gggggaggagggggtgggggctactcagctgcagggggtgttgggggatccggtggagga
ggaggtggtgggagcggacaggtttccagccgcccgagctcggccacctgcaagcggtgc
gattcatgcaagaagccgggcaacttgtatgacatcagtgaggacaaccacctcctcctg
gatcagctagggggcaagttcgtactggagggtgggaagggaggaggaggcggaggcgga
ggtggaggtggaggggcccagactcaggcgcagaggcgcaagtttggaccaggcggcagg
gtcctgcgtaggcagcattcttatgacacattcgtagacctgcagaaagaaggggcgggc
aggatgggaggttcaggatttgggggcggtggagcttccatgctccctccaccacggagt
gtgagcctgaaagacaaagatcgctacatggaaggtgcgagcccctatgcccagatgttc
gagcggtatgcaggtggggagcgggagacaggttttttcgctggcggggaccgggggaag
ggcgggggctcgtcatttagcttgttccgtgggggtgaaggtgggttgcaccgtcgttcg
gtaggcgagcgggacatgagggacagggatagaggcatgatgggaggaggaggtatgggc
ggtacccgaggggtcgggacttactccttgtctaaatctctctacccagataaggtgaac
cagaacccattcatcccgaccttcggcgacgaccagtgcctattacatggcgccaaatcg
tactacgtcaaaaagcagcagacacagccgcagcagcaacagacgcaacaacagcagcag
cagcagcagctcctcaacaacaaccgggctgacttccgaggctccatgggggtgacttcc
tatttgccagcctctgcctctgccggggtcatgtccaacgtgggaccccggttccccaag
gagctgtgcctgggtgggcccctcggcaaccaccacggaggggcggcgggcaacaacaag
ctgctgtcagcaagggacgggttagggatggggcaaggacagagaccattcaacggctct
agtaacggacacgtatacgagaagctctccagtattgagtcggatgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (48)   

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