KEGG   Astyanax mexicanus (Mexican tetra): 103028390
Entry
103028390         CDS       T05042                                 
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103028390 (efl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103028390 (efl1)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    103028390 (efl1)
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 EFG_IV MMR_HSR1 DUF1825
Other DBs
NCBI-GeneID: 103028390
NCBI-ProteinID: XP_022525240
Position
5:4762193..4933029
AA seq 1141 aa
MGHTSLEKLIRLQKKTSNIRNICILAHVDHGKTTLADCLVASNGIISTRLAGKMRYLDSR
EDEQIRGITMKSSAISLHFTSGESEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLSPQEAYTHLQKILEQVNAVTGAL
FTSKVLEERAVKEAELEGAVPEGEVPELSGGEQVYDWSAGLEETDDSHLYFSPDQGNVVF
ASAFDSWGFSIHQFAQIYCQKMGIRSEVLQKTLWGDFYINPKAKKIMKGAQSKGKKPLFV
QLVLDNIWSLYDAVVTRRDKEKVEKIVASLGLKVMARDLRHSDPKVLLSAICSQWLPLSQ
AVLSMVCERLPSPSEMSAERVEKLMSVGTRRFDSLPEKTQQLKQAFLDCVSEDSAPVIVF
VSKMFAVDSKALPQNKQRPLTQEELAQRRELARQRHAERQATSQIAEDPDSASAGGAQTA
TPTNNTNTDADALCAQTEALSVKPAEEEEEKKEHFIAFARVYSGVVRRGQRVFVLGPKYD
PALTLRTLPEGCSADDTVPSVPHLACCTLEHLYMLMGRELEELEEVPAGNVLGIAGMEDF
ILKSATVSTSPACPPFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLI
QETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETIIRPPKVDMVNEDLGR
QQKVAVIHQAKEEQSKYHEGPQVDSGGLVNLTTPNKMATIGVRAVPLPEEATRLLEGSAE
LIRTMEQFSLFAREGKTLEISQKTLEQIQEFRTRLEGHLQGWKWRNAVERIWAFGPRRCG
PNILLNGVEGYQRPSVWQCLEGEKEKPEAATLRDFDNSIVNGFQLATLSGPMCEEPLMGV
CFSVESWEMKLAPQFTQQDSVEEETTSRQGSENSDNETRAAVSGESESGGSNEAEASSSS
AGGQSRWRGDVTDCYGPFSGQLIAAMKEACRHAFQAKPQRLMAAMYTCEIMATAEVLGRV
YGVLSKREGRVLNEEMKEGTDMFIIRAVLPVAESFGFADEMRKRTSGLASPQLVFSHWEV
ISSDPFWVPTTEEEYLHFGEKADSANQALKYMNAVRKRKGLYVEEKIVEHAEKQRTLGKN
K
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggggcacacaagtctggaaaagctcatcagactacagaaaaagacctcgaatattagg
aatatatgtattctggctcatgttgatcatggaaaaacgacactggcggattgtttggtt
gcgagcaatggcatcatttccactcgattagcaggaaagatgaggtatctggacagtcgg
gaggatgagcagatccggggaataactatgaagtccagcgccatttctttacactttaca
tcaggagaaagtgaatacctcattaatttgatcgactctcccggtcacgtggatttctcc
tctgaagtgtccacagcggtgcggctgtgtgacggcgctatcgttgtggtggacgctgta
gagggagtatgtcctcagactcaagcagtgctgcggcaggcgtggctggagaacatccga
cccgtactcgttattaataagatcgatcggttgattgtagagctcaagctgagtccacaa
gaggcctacacccacctgcagaaaattctagaacaggtaaacgctgttacaggtgctctg
ttcacttctaaagtcctggaggagagggcagtgaaggaggcggagcttgagggggcggta
cctgagggggaggttccagaactcagtggaggggagcaggtttacgactggagcgccggt
ctggaggagacagacgattcacacctgtacttcagcccagaccagggtaacgtggtgttc
gccagcgccttcgacagctgggggttcagcattcatcagtttgcgcagatctactgtcag
aagatgggcattcgctcggaggttctgcaaaagaccctgtggggcgatttctacatcaac
cctaaagccaagaagatcatgaagggagctcagtctaaagggaagaagcctctgtttgtc
cagctggtcctggacaatatctggagtttatatgacgctgtggtgaccagaagagataaa
gagaaagtggagaagattgtggcgtctttagggttaaaggtcatggcgcgggaccttcga
cattccgaccctaaagttctcctgagtgctatctgcagccagtggttacccctctctcag
gcagtgctgtcgatggtgtgtgagaggctgccgtctccttctgaaatgagcgctgaaagg
gtggagaagctgatgagcgtcggcacgcggaggttcgactcactgcctgagaaaacacag
cagctgaaacaagcgttcctggactgtgtgagtgaagactcagctccagtgatagtgttt
gtgtcgaagatgttcgctgtagactccaaggccctccctcagaacaagcagaggcccttg
actcaggaagagctcgcccagcgccgggagttggccagacagagacatgcggagaggcaa
gcgaccagtcagatcgcggaagaccctgactcagccagcgccgggggcgcccagacagcg
acccccaccaacaacaccaacacagatgccgatgcactgtgtgcacaaacggaagctcta
tcagtgaagcccgcagaggaagaggaggagaagaaggagcacttcatcgcgttcgctcgt
gtctacagcggcgtggtccgcaggggtcagagggtgtttgtgcttggccccaaatacgac
cctgcgctcaccctcagaacgcttcctgaaggatgttcagcagatgacactgtgccctcc
gtgccccacctggcctgctgtacgttggagcatctctacatgctgatgggtcgtgaacta
gaagagctagaggaggttcctgctggtaatgttttagggattgcaggaatggaggacttc
atcctgaaatcagccactgtctccacctctccagcttgcccccccttcacccccctcaac
ttcgaggccacgcccatcgtcagagtcgcaatcgaacccaaacatcccagtgaaatgcct
aagctggtgcgtgggatgcggctgctgaatcaggctgacccgtgtgcagaggtgttgatc
caggagaccggagaacatgttctggtgacggccggagaggtgcacctgcagcgctgtctg
gatgacctcagagaaagatttgccaagattgagatcagcgcctccaagcccatcatcccg
ttccgcgagaccataatccgcccgcccaaagtggacatggtgaatgaggatctgggccgg
cagcagaaggtcgcggtcatccatcaagccaaggaagagcagtccaagtaccatgagggg
ccccaggtggactccggtggcctggtcaacctcaccacccccaacaaaatggctaccata
ggggttcgggccgttccgcttcccgaagaagcgacgcggctgctggaggggagcgccgag
ctgatccggaccatggagcagttcagcctgttcgctcgagaaggaaagactctggagatc
agccagaagactcttgagcagattcaggagtttaggaccaggctggagggtcacctgcag
ggctggaagtggaggaacgctgtggagaggatctgggctttcgggccgaggcgctgcggg
cccaacattctcctgaacggtgtggagggatatcagagaccatcggtttggcagtgtttg
gagggagagaaggagaaacctgaagctgctacgcttcgagattttgataacagcatcgtt
aatggtttccagctcgctacgctctccggcccgatgtgcgaggagcctctgatgggcgtc
tgcttctcagtggagagctgggagatgaaattagcacctcagtttactcagcaggactcg
gtggaggaggagaccacttctcgacagggttcagagaacagcgacaatgaaacaagagct
gcagtgagtggagagtctgagtctggtggaagtaatgaagcagaagcaagctcttcgtct
gctggaggtcagagcagatggaggggggacgtgacggactgctacgggccgttctccggg
cagctcatcgccgctatgaaggaggcctgccgccacgccttccaggccaaaccccagaga
ctgatggccgccatgtacacctgcgagatcatggctactgctgaagttctgggtcgtgtg
tatggtgttctctctaagcgtgaggggcgtgtcctaaatgaagagatgaaggagggaacg
gacatgttcatcatcagggccgtcctgcctgtggccgaaagcttcgggttcgcggacgag
atgaggaagaggaccagcggcctggccagcccacaattggtcttcagccactgggaggtt
atctccagtgatccgttctgggtgcccaccactgaggaggagtatctgcactttggagaa
aaggctgattcagctaatcaggcgctgaagtatatgaacgccgtccggaagcgtaagggt
ctttacgtggaggagaagatcgtggaacatgcggagaagcagaggaccctcggcaagaac
aaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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