KEGG   Astyanax mexicanus (Mexican tetra): 103029270
Entry
103029270         CDS       T05042                                 
Symbol
gpatch1
Name
(RefSeq) G patch domain-containing protein 1
  KO
K13123  G patch domain-containing protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103029270 (gpatch1)
Spliceosome [BR:amex03041]
 Complex C
  Other components
   Complex C specific factors
    103029270 (gpatch1)
SSDB
Motif
Pfam: DUF1604 G-patch Cwf_Cwc_15 G-patch_2 TFIIF_alpha
Other DBs
NCBI-GeneID: 103029270
NCBI-ProteinID: XP_007244933
Ensembl: ENSAMXG00000020177
Position
Unknown
AA seq 990 aa
MASDGESDEDFVTYGIPLEPLEEDEPLRKPVPLQDQTVKDEKGRFKRFHGAFTGGFSAGY
FNTVGTKEGWTPSTFVSSRQQKAEKQNARPEDFMDEEDFGEHGIAPREITTTDDFASGRP
DQIRDKAKAISSLSAPIPGDTLLEELIAPARSSIGVQLLRKMGWKDGQGIGPRLKRRQRK
QDTDEKMYGCALPPTGSEESEDDDEFVPENVTFAPKDVIPVDFTPKDDIHGLGYRGLNPL
QALGGGSGMGHINLFTVDSERTSSLFGGRNRGKQRKGGIGGQAFGVGAMEEDDDDIYHRD
TMSNYDAVLGGEEPGDGLYGWTAPQQYKTKKRNSNRDAAYVGKILEGFTLGSQPTEAKTV
FPPPDLPRDYRPVHYFRPVVDPSSVSPLVAQALQTSRGHLSLQDAPQQGRHTLDSAQRRE
MLGETTLQGPSSVFDLLDRKDRERLSGFQKSAEEKRAQGDMSSAQGRAAVVAAAKASALQ
SLSSRFQSTSAVPQSDSSAQTQPSAPQRDPQIQSPASTQLALSAWSSPTAQSGQTFKPFD
KNPAKQARYDLYISRLKQGDKDALELSLDQSMTEWERGREREEFIRAAVLYKPSHSLLSS
RFTHGKHEDDTDSVDVARDQENDVDDKQAAVKMKMFGKLTRDTFEWHPDKLLCKRFNIPD
PFPGSGIIGLPKVKRDKFSVFNFLSVMDPPASTSSSASAPPAPKSSSVASGKRSRWDVSG
QESQVKDSLSRFISEARIEVSAAQQDQTSTDTPPADSATVTAESKTAEPQADQTAKKAED
EEEAEEEEVRPPIDLFKAIFASSSNEGSSSSSEEDSGEEEAQAVEPQPIVPVITPTVNTI
ALPVLPQAPPTSSLCATTEPKPPLEDGDQKHASAAPPVQTGDLDSEEFGPRLPPPGQVFT
PSPAQEEKPKQQSKEKHKAKKEHKHRKEKKHKKKSKKHKHKGKQKKKKKKAEETDTSSDS
DSDSDDDDDNLGPVSTNDLLQRLKILRGKK
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggcgtcggacggagagagtgatgaggatttcgtaacttatgggattcctctggagccg
ctggaagaagatgagccgctgcggaagccggttcccctgcaggatcagacggtaaaggat
gagaagggccgcttcaagaggtttcatggagctttcaccgggggcttttccgccggatac
ttcaacactgtgggcaccaaggaaggctggacaccatctacttttgtgtcatcacggcag
cagaaagcagagaagcagaatgccagaccagaagacttcatggatgaggaggatttcggt
gagcatggtatcgcaccccgagagatcaccaccacagacgactttgcttctgggaggcca
gatcaaatccgggataaggccaaagccatcagttccttatcagctcctattccaggagac
accctgctggaggagctcatcgcacctgcacggtcctctattggggtccagctgctccgt
aaaatgggttggaaggatgggcaagggattggacccaggctgaagagaagacaacgcaaa
caagacacagatgagaaaatgtatggttgtgctttaccacccactggatctgaggagtca
gaggacgatgatgagtttgttccagagaatgtaacctttgcacccaaagatgtgattcca
gtggatttcacccctaaagatgacattcatggcctgggctataggggactgaaccctctg
caggcgctgggcggtggttccgggatggggcatatcaatctgttcacggttgactctgaa
aggacgagcagcctgtttggaggcaggaatagagggaaacagcgtaaaggtggaatcgga
ggacaggcatttggagtgggagcgatggaggaggacgatgatgatatctaccacagagac
accatgtccaactatgatgctgtattgggaggggaggagccaggagatggtctgtatggg
tggacggcccctcagcaatacaagacaaagaagagaaactcaaacagagacgctgcgtat
gtggggaagatacttgaaggtttcaccctgggatctcaacccacagaagcaaaaacagtg
tttcctcccccagatcttccacgggattatcgaccagtgcattacttccggccggtggtg
gacccgtcgtctgtgagcccactggtagcccaggccctacaaacctcccgtggtcaccta
tcattgcaggacgcaccacagcaagggcgccacacgctggactctgcacagaggagagag
atgctgggagaaacaacactacagggccccagctcagtgtttgatctgctggacaggaag
gatagagagagactgagtggcttccagaaatcagcagaagaaaagcgagctcagggggac
atgtcctctgctcagggtcgtgctgctgtcgtggctgcagccaaagcctctgccctgcag
tccctatccagccgcttccagtccacctctgctgtccctcagtctgacagcagtgcccag
acccagccatctgctccccagagagatccgcagatccagtctccagcatccacccagcta
gccctcagcgcctggtccagccctacagctcagagcggccagaccttcaagccttttgat
aaaaacccggccaaacaggcccgatacgacctttacatcagccgactgaagcagggggat
aaagatgcgcttgagttgagtctggaccagtcaatgaccgagtgggagagagggagagag
agggaggagtttattcgtgctgcagttctctataagcctagtcactccttactgtcctcg
cgcttcacccacggcaaacacgaggatgacacagactcggtggatgtggcacgagatcaa
gagaatgacgtggatgataagcaggcagccgtcaagatgaagatgtttgggaaactgaca
agagacacctttgagtggcatcctgataaactactatgcaagagatttaatatcccagat
cctttcccaggctcaggtataattggtctgcccaaagtgaagcgagacaagttctccgtg
ttcaacttcctgtctgtaatggatccacctgcatccacctccagctctgcatctgcccct
cctgcccctaagtcctcgtctgtggcctctggcaagcgctctagatgggatgtatccggc
caggagtcccaggttaaagactcactcagcagattcatcagtgaggctcggatcgaagtg
tctgcagcacagcaagaccagacgagcactgacacacctccagcagactctgctacagtc
actgctgagtctaaaacagcagagcctcaggctgatcaaacagcaaagaaagctgaagat
gaggaagaggctgaagaggaagaagttagacctccgatagacctgttcaaggccatcttt
gctagttcgtccaacgaggggagctcatcttcatccgaagaagacagcggtgaagaagag
gcacaggcagtggagccccagccaattgtaccagtcatcacaccaacagtcaacactatt
gccctgcctgttttaccacaggctcctcccacatcaagcctgtgtgctacgacagaacct
aagcctccgttagaggacggagatcagaagcatgcctctgctgctccccctgtacagact
ggagaccttgacagtgaggagtttgggcccagactaccacctcctgggcaagtattcaca
ccatcgccagcacaggaagaaaagccaaaacagcaaagcaaagagaagcacaaagccaag
aaagagcacaaacaccggaaagagaaaaagcataagaagaagagtaagaaacacaagcat
aaaggaaagcagaagaaaaagaagaagaaagccgaggagactgacaccagctctgattct
gactctgacagcgatgatgatgatgacaacctggggccagtatccactaatgacctccta
cagaggttaaaaatcctccgtggcaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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