KEGG T05042: 103032623

Astyanax mexicanus (Mexican tetra): 103032623

Entry

103032623         CDS       T05042

Symbol

gpc3

Name

(RefSeq) glypican-3

K08109

glypican 3

Organism

amex Astyanax mexicanus (Mexican tetra)

Brite

KEGG Orthology (KO) [BR:amex00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:amex00535]
    103032623 (gpc3)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amex00537]
    103032623 (gpc3)
Proteoglycans [BR:amex00535]
Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   103032623 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amex00537]
Others
  103032623 (gpc3)

SSDB

Motif

Pfam:

Glypican

Other DBs

NCBI-GeneID:

103032623

NCBI-ProteinID:

XP_022539961

Position

24:complement(43417675..43674395)

AA seq 590 aa
MSGGKLALALLWCALLVPASVPSAPGLRCHQVRSSFQSLYPGTKWAPETPVSGSDLQVCQ
PKGLTCCSRKMEERYLLTAKQNMESGLQASSGQLKLLIIQNAALFQEAFDMVLRLGRNST
LAMLREEFPALVGGASGAVTQLFLEMSLYILGSEANVDDMVTSFFSRLFPLAYRRVLGNG
ATSGTSEDCLRRAWRESSAFGSYPKLMMTRLSHSLPATRVFLQALNLGIEVVNTTQHLKA
GRDCGRALLRLWYCPHCQGLLEARPCRALCLSTMGSCLGGAAEVQPHWRSYVEGLGTLDS
SMRGEQDMEEVVLRLHVIIKLALKHAVGAKTRLNTQVSSMCTHTPQRVTRGAASPAEHAV
PSTVVRSTQPANPDPDQTLVGRRREFIQSLRGFSLFYGGLGEALCNREPAALNSSLCWNG
QEMTDKLTGPGLKRPHPHGSETKQKPPEPVVSQIIDKLKHINQLLRMVTTPEKRWKARAG
GGATRKDPKRQNQGLEDEEGLESGDCDDEDECTGVSGLGPPPRRKRLRIFADLADNLAMD
DLTFHELLLTPRLATDSHGGASAPGAAQAVRVHSCIFSLTFILLLLCGLH

NT seq 1773 nt +upstreamnt +downstreamnt
atgagtggaggaaagttggcgctcgcgctgctgtggtgcgctctgctcgtgccagcctct
gtgcccagcgctccgggactgcgctgccaccaggtgcgctcctccttccagtccctctac
ccgggcacgaagtgggcaccagaaactccagtctcaggctcagacctgcaggtttgccaa
cccaagggcctcacctgctgctcgcgcaaaatggaggagcgctacctgctcaccgccaaa
cagaacatggagtccggcctgcaggccagcagcggccagctgaagctcctcatcatccag
aacgccgcgctctttcaagaggcctttgacatggtcttgcgcttaggtcgtaactccacc
ctcgccatgctgagggaggagttccctgctttagtgggcggagccagtggtgctgtcact
cagctcttcctggagatgtctctctacatcctgggctcagaggccaacgtggacgacatg
gtgacgtccttcttttcccgcctcttccccctggcctaccgccgggtcctcggcaacggg
gcgacatcgggcacttcggaggactgcctgcggagggcgtggcgcgagtcctctgcgttc
ggctcgtatcccaaactgatgatgacgcgcctgtctcactcgctgccggccacgcgcgtc
ttcctgcaggcgctgaacctgggcatcgaggtggtgaacaccacgcagcacctgaaggcg
ggccgggactgcgggcgggcgctgctcaggctgtggtactgcccgcactgccaggggctg
ctggaggctcggccgtgccgggctctctgcctcagcaccatggggtcctgcctcgggggg
gcggccgaggtgcagcctcactggaggagctacgtggaggggctggggaccctggacagc
tccatgaggggagagcaggacatggaggaggtggtgctcagactgcatgtgatcatcaaa
ctggccctcaaacacgctgtaggagccaagactcgattaaacacacaggtgagcagcatg
tgcacgcacacgccccagcgcgtgacccgcggtgcggcgtctccagcggaacacgcagtc
ccctccacggtggtccgcagcacgcagccggccaacccggaccctgaccagactctggtt
gggcggcgcagagagttcatccagagtctgaggggcttcagtctgttctatgggggtctt
ggagaggctctttgcaaccgagagccagcagcactcaacagctccctctgctggaatggg
caggagatgacagacaagttaactggtccaggtttgaagagaccccaccctcacggttca
gagaccaaacagaagccccctgagcctgtcgtcagccagatcatcgacaaactcaaacac
atcaatcagctgttgcggatggtgaccactccagagaagcgatggaaggcccgggcagga
gggggcgctacgagaaaagatcccaaacgacagaaccaaggtctggaggatgaggagggt
ctggagagtggtgactgtgatgatgaagatgagtgcactggagtttcaggacttgggccg
ccccctcgccgcaaacgattgcgtatctttgcagatctggcggataacctggcgatggat
gatctcaccttccacgagttgctcctgacccccaggctggccacagactcacacggagga
gcatcggcacccggagcggcgcaggctgtacgtgttcactcctgcatcttctcactgacc
ttcatccttctcctcctctgtggactccactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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