KEGG   Astyanax mexicanus (Mexican tetra): 103038765
Entry
103038765         CDS       T05042                                 
Symbol
map1lc3c
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3C isoform X2
  KO
K10435  microtubule-associated protein 1 light chain
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04137  Mitophagy - animal
amex04140  Autophagy - animal
amex04216  Ferroptosis
amex04371  Apelin signaling pathway
amex04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    103038765 (map1lc3c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103038765 (map1lc3c)
   04137 Mitophagy - animal
    103038765 (map1lc3c)
  09143 Cell growth and death
   04216 Ferroptosis
    103038765 (map1lc3c)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    103038765 (map1lc3c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103038765 (map1lc3c)
   03029 Mitochondrial biogenesis [BR:amex03029]
    103038765 (map1lc3c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amex04812]
    103038765 (map1lc3c)
Membrane trafficking [BR:amex04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    103038765 (map1lc3c)
Mitochondrial biogenesis [BR:amex03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    103038765 (map1lc3c)
Cytoskeleton proteins [BR:amex04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     103038765 (map1lc3c)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 103038765
NCBI-ProteinID: XP_007246181
Ensembl: ENSAMXG00000021295
Position
5:complement(27740771..27742560)
AA seq 136 aa
MPPFEKTQHPKPFKQRKSFGKATRKQEVAGIRSKFPTKVPVIIERYNREKYLPPLDKTKF
LVPQELTMTQFVTIIRNRMTLMPSQAFYLLINNSGIASMSLTMAQLYKDHKDEDGFLYMT
YASQEMFGYWDEGPLR
NT seq 411 nt   +upstreamnt  +downstreamnt
atgcctccgtttgagaaaacccagcaccccaagcccttcaaacagaggaagagtttcggt
aaagcaacgagaaagcaggaggtggcaggaatccggtccaagtttccaaccaaagtcccg
gtgataattgaacgctacaacagagagaaatatctgcctcctctggataaaaccaagttt
ctcgtcccacaagagctaaccatgacccagtttgtgaccataattagaaaccgcatgacc
ttaatgccgagccaggccttctacttgctcatcaacaactctggtatcgccagcatgtcc
ctgactatggcgcagctttacaaagaccataaagatgaagatggcttcctttacatgacc
tatgcctctcaggaaatgttcgggtattgggatgagggaccactgagatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system