KEGG   Astyanax mexicanus (Mexican tetra): 103039252
Entry
103039252         CDS       T05042                                 
Symbol
xpo1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03008  Ribosome biogenesis in eukaryotes
amex03013  Nucleocytoplasmic transport
amex03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103039252 (xpo1)
   03008 Ribosome biogenesis in eukaryotes
    103039252 (xpo1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103039252 (xpo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103039252 (xpo1)
   03009 Ribosome biogenesis [BR:amex03009]
    103039252 (xpo1)
   03016 Transfer RNA biogenesis [BR:amex03016]
    103039252 (xpo1)
   03036 Chromosome and associated proteins [BR:amex03036]
    103039252 (xpo1)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103039252 (xpo1)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    103039252 (xpo1)
  Pre-60S particles
    103039252 (xpo1)
Transfer RNA biogenesis [BR:amex03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    103039252 (xpo1)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     103039252 (xpo1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 BspA_v
Other DBs
NCBI-GeneID: 103039252
NCBI-ProteinID: XP_007260671
Ensembl: ENSAMXG00000003069
Position
12:complement(4166902..4192523)
AA seq 1071 aa
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDANVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHSTLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPQIFDAVFECTLNMINKDFEE
FPEHRTHFFYLLQAVNSQCFPAFLTIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
ALNTGTPVNNQAYMQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHELPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcagatatgacaatgttagcggaccatacagcccggcagctgctggacttcagt
cagaagttggatatcaacctacttgacaatgtggttaactccatgtattatgatgttggc
tcccagcaacgactggcacaggaagtcctcaccaacttgaaagatcatccggacgcatgg
accagagtggacactatcctggagttttctcaaaatatgaagactaaatactacgctctt
cagattctggagaccgtcattaaaacacgttggaaaattctcccaaggaaccagtgtgaa
ggaattaagaagtatgtcgtggggctgatcatcaagacttcctcagatgccaatgttgtt
gagaaggagggagtgtacctggcaaaactaaacatgatcttggtacagatcttgaagcag
gagtggccaaagcactggcccacgtttatcagcgacatcgttggcgccagtcgtacgagc
gagagcctctgccagaacaacatgatcatcctgaagctcctcagtgaggaagtattcgat
ttctccagcggacagatgactcaggtcaaagccaagcacctgaaggacagcatgtgcaat
gaattttcacagatattccagctttgccagtttgtcatggaaaattcccagaatgcaccg
ctggtccactccacactggagacccttcttcgcttcctgaactggattccactgggttac
atttttgagaccaaactcataagcaccctggtttataagtttctgaacgtccccatgttc
cgaaacgtgactctgaagtgtctgacggagattgcgggtgtcagtgtcaatcagtacgag
gagcagttcgtcaacctcttcaccctgacaatgatgcagctcaaacagatgctgcctctg
aatacaaatatccgcctggcctattcgaacgggaaagatgatgagcagaacttcatccag
aacctgagcctgttcctctgtaccttcctcaaagagcacggtcagctcattgaaaagagg
ctcaatctacgtgagacactcatggaggctctccactacatgctgttggtgtctgaagtt
gaggagacagagatttttaagatctgtttggagtactggaaccacttggctgcagagctg
tacagagagagtccctttagcacttcaacctcgcccctgctttctgggagccagcatttt
gacgtgcctccacgcagacacctctacctgcctgttctatccaaggtgcgtttgctaatg
gtgagccgcatggctaagcccgaggaggtgctggttgtggagaacgaccagggagaggtg
gtgcgagagttcatgaaggatacagactcaatcaacctctacaaaaacatgagagaaaca
cttgtctacttgacccatctggactatgcagacaccgagcgaatcatgacagagaagctc
cataaccaggttaatggtactgaatggtcctggaggaacctgaacacgctgtgctgggct
atcgggtcaatcagtggggccatgcacgaggaggacgagaagaggttcctcgtcacggtt
atcaaggacctgctgggactctgtgagcagaagcgagggaaggacaacaaggccatcatc
gcctccaacatcatgtatatcgtaggccagtacccacggttcctccgcgcccactggaag
ttcctgaagacggttgtgaacaagctgtttgagttcatgcatgagacgcatgatggagtt
caagacatggcctgtgatacgttcattaagattgctcagaagtgcaggaggcattttgtt
caggtgcaggtcggagaggtgatgcccttcattgatgaaatcctcaataacatcaatacg
atcatctgtgatctgcagccacagcaggttcacacgttttacgaggcagtgggttatatg
attggcgctcagacggatcaagctgtacaagagcacctcatagagaagtacatgctgctt
cccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggatatcctgaag
gacccagagacggtgcgtcaactcggcagcatcctgaagaccaacgtgagggcgtgtaag
gctgtaggacacccgtttgtggtgcagttaggccgcatttacctggacatgctcaacgtc
tacaagtgcttgagtgagaacatctcctctgccattcagaccaacggtgagatggtgacg
aagcagcctctgatcaggagtatgcgcacggtgaagagggagaccctgaagctcatctct
ggatgggtcagccgctccaatgatcctcaaatggttggtgagaactttgttcctcctctg
cttgaggccgtcctgatcgactatcagcgtaacgttccggctgctcgggaacctgaagtt
ctcagcactatggccaccatcgtcaataaactcggggctcacatcactggagaaatcccc
cagatctttgacgctgtctttgagtgcactctgaacatgatcaacaaggactttgaggag
ttcccagagcacaggacacacttcttctacctgctgcaggcggtcaactcgcagtgtttc
cctgctttcctgaccattcctccagctcagttcaagctggtgctggactctatcatctgg
gcctttaaacacaccatgaggaacgtggcagacacaggtctgcagatcttgtacacgttg
ctgcagaatgtggctcaggaggaggcggcagctcagagcttctatcagacgtacttctgc
gacatacttcagcatatcttctctgtcgtcactgatacgtcccacacagctggtttgacg
atgcacgcctccatcctggcctacatgttcaacctggtggaggagggaaaaatcagtgtt
gctctgaacactggcaccccggtcaacaaccaggcctacatgcaggaatacgtggccaac
cttcttaagacggccttcccacacttacaggatgcccaggtgaaggtgtttgtaacaggt
ctgttcagcttgaatcaggacatacctgccttcaaagagcacctgagggacttcctggtg
cagataaaggagtttgcgggcgaggacacaagcgacctgtttctggaggagcgcgaggcg
tcgctgcgtcaggctcaggaggagaaacacaaaatccagatgtccgtgccaggaatactc
aaccctcacgaactgcccgaggaaatgtgcgactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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