KEGG   Astyanax mexicanus (Mexican tetra): 103039334
Entry
103039334         CDS       T05042                                 
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
  KO
K06670  cohesin complex subunit SCC1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    103039334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103039334
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    103039334
SSDB
Motif
Pfam: Rad21_Rec8_N Rad21_Rec8 SMC_ScpA ATHILA
Other DBs
NCBI-GeneID: 103039334
NCBI-ProteinID: XP_022535600
Ensembl: ENSAMXG00000016960
Position
18:32905654..32915649
AA seq 637 aa
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREEVGNLSIMADNDFGDFGMDDREIMREESAFEVD
IIHGSSASNLLLEAEPGPAHLPDKSTNLDYDDFGENNLENSDGGILVDKLLSSDGGGGIF
DDPPAITDSVMMPPDHGDDDDDFDNFSPAGAPDSPDSGPVEPLPNTTDQTEQTTLVPNEE
EAFALEPIDITVKETKAKRKRKLIVDSLKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLM
MWKETGGVEKLFSLPAQPLWNSRMLKMFTRCLTPLVPDELRKRRKGGEADSLEEFLKELE
NPEVPREEQITQRSDVIDQTIVEEPSMLQVSSIEGSRTALDETLMPPPSRQRGVKRKSQE
AEAALPPMGILDQSLQPMEQSVLSQQLDMPQVDLPPEDTTNLSRLVPELDLLGEKSKDKD
DSEEEEEEGEGQGDQDQEERRWNKRTQQMLHGLQRVVAKTGAQSISLLELCKNNNKKQAA
AKFYSFLVLKKQQAVELSQSEPYSDIIATPGPRFHLV
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgttttacgcccacttcgtcctcagcaaacgtgggccgttggccaagatttggctagcg
gcccactgggacaagaagctgaccaaagcccatgtcttcgagtgcaacttggagagcagt
gtggagagcatcatttcaccaaaggtgaaaatggctttgcgtacgtctggtcatcttctc
ctgggtgtggtgagaatctaccacaggaaagccaagtacctgcttgctgactgtaacgaa
gccttcattaagatcaaaatggctttccgaccaggtgttgtggatcttcccgaagacaat
cgggaggctgcctacaatgccatcaccttgccagaggagttccatgactttgatcagccc
cttccagatcttgatgacatagatgtagcacaacagttcactctgaaccagagccgagtg
gaggagatcaccatgagagaagaagtgggcaacctcagcatcatggcagacaatgacttt
ggtgacttcggcatggatgatcgggagatcatgagggaggaaagtgccttcgaggtggac
atcattcacgggtcatctgcctccaaccttttgctggaagcagaacctggtcctgcccac
cttcctgataagtcaaccaaccttgactatgatgactttggtgaaaacaacctggagaac
agtgatggtggaatacttgtggacaaacttttgagcagcgatggtggtggaggaatattt
gatgatcctccagccatcactgacagcgttatgatgcccccagaccacggagatgatgac
gacgactttgataacttttccccagccggtgctccagacagtcctgattctggccctgtg
gagcctctacccaacaccacagaccagaccgaacagaccacgctggtgcctaatgaggag
gaggcttttgccctggagcccattgacatcactgtaaaagagacgaaggctaagaggaag
aggaagctgattgtggacagcctgaaggaactcgacagcaagaccatccgcgctcagctg
agcgactactccgatattgtcaccacgctggatctggctccgcccactaagaagctgatg
atgtggaaggagactggaggagtggagaagctcttctctctgcctgcacagcctctctgg
aacagcagaatgcttaagatgttcacacgctgcctgaccccgctggtaccagacgagctg
aggaagagaaggaagggtggcgaggccgacagcctggaggagttcctgaaggagcttgag
aatcctgaggttcctcgtgaagagcagatcacacagaggagtgatgttatcgatcagacc
attgtggaggagcccagcatgctgcaggtttcatcaatcgagggcagcagaacggctctg
gacgagactctgatgcctcctccttccaggcagcggggagtcaagcgcaagtcccaggag
gccgaagccgctctgccgccaatgggcatcctcgatcagtctctgcagccaatggagcag
tcagtgctgtcccagcagcttgatatgccacaggtggatctgccacccgaggacaccacc
aacctctccagactcgtccctgagctggacctgctgggagagaagagcaaagacaaggac
gacagcgaagaggaggaggaggaaggagagggtcaaggagaccaggaccaagaagagaga
agatggaacaagagaacccagcagatgctgcatgggcttcagcgtgtggtggcgaagacc
ggagcccagtccatcagcctgctggagctgtgcaagaacaacaacaagaaacaagccgcc
gccaagttctacagtttcctggtcctgaagaaacagcaagccgtggagctgtcccagtct
gagccctacagcgacatcatcgccacgccgggaccgcggttccaccttgtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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