KEGG   Astyanax mexicanus (Mexican tetra): 103039376
Entry
103039376         CDS       T05042                                 
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
  KO
K06063  SNW domain-containing protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03040  Spliceosome
amex04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103039376 (snw1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    103039376 (snw1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103039376 (snw1)
Spliceosome [BR:amex03041]
 Complex B
  Other components
   Prp19-related factors
    103039376 (snw1)
 Complex C
    103039376 (snw1)
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 103039376
NCBI-ProteinID: XP_007241899
Ensembl: ENSAMXG00000009141
UniProt: A0A3B1JN73 A0A8B9J601
Position
3:complement(71054445..71060960)
AA seq 536 aa
MSLASFLPAPTQLSQDQLESEERTRAQRSQSTSLMLTRREPPPYGSRKGWVPRSIEDFGD
GGAFPEIHVAQYPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQSQGKDKVIFSKYTDLL
PKEVLNDDAPELQRPDEEAIKELTEKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKGHGEKGGEDGEARERDEIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPHTSSEAQYDQRLFNQSRGM
DSGFAGGEDETYNVYDQPFKSGRDMAQNMYRPSKNADKDMYGDDLDTLMQSSRFVPDREF
SGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSASGRSKDYDHEKKRRKE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgtctctggccagttttttacccgcgcccactcagctgtcccaggaccagcttgagtca
gaagagaggaccagagctcagaggtcccagtccacatctctgatgctcactcgaagagaa
ccacctccctatggttctcgaaaaggatgggttccccgcagtattgaggattttggagat
ggtggtgcattccctgagatccacgtggctcagtatccactggagatgggcagaaaaaag
aagacatccaatgcccttgctgtacaggtggatgctgagggcaaaataaagtatgatgca
attgctcgacaaagccaaggaaaggataaggttatattcagtaaatacacagatttgctt
cctaaagaagtgctcaatgatgatgccccagagttacagagaccagatgaagaggccatt
aaagagcttacagagaagaccagagctgctttggacaagcaggtttcccagaaaattgct
gcagcaatgcctgtacgtgcagcagataaacaggcaccagcacagtacatacggtacaca
ccttctcagcagggagtagcattcaactcgggggccaagcaaagggtcatccgtatggtg
gagatgcaaaaagatccaatggaacccccacgttttaaaattaataagaaaattcctcgt
ggacctccctctcctcctgctccagttatgcactctcccagtagaaagatgacggtgaaa
gaacaacaggagtggaagattcctccatgcatttccaactggaagaacgcaaagggttac
acaatcccactggataaacgtcttgctgctgatggaagaggtcttcagacagttcatatt
aatgagaactttgcaaagttagctgaagctctctacattgcagatagaaaggccagagaa
gcagtggagatgcgcgcccaggtggaaaagaagatggcacagaaggaaaaagaaaagaag
gaggagaagcttagggagcttgcgaagatggcgcgagacagaagagcagggatcaaaggc
catggagaaaaaggtggtgaggatggtgaagccagagagcgtgatgagattcgtcatgac
aggaggaaagagagacagcacgatagaaacatctccagagcagcccctgataaaaggtct
aaactgcagcgggaccaagaccgagacatcagtgaactgattgcgctgggccagcccaac
ccccacacctccagtgaggctcagtatgaccagaggctgttcaaccagagcaggggaatg
gatagtggctttgctggaggagaagatgagacatataatgtgtatgaccagccctttaag
agtggcagagacatggcacagaacatgtacaggcccagcaaaaatgcagacaaggatatg
tatggagatgacctggacacacttatgcagagcagcaggtttgtacctgatagggaattc
tctggcactgaccatggacctcgcagggatggacctgtccagtttgaggaggatcctttc
ggtctggataagttcttggaggaagccaagcaacacggtggctccaaacggccgtccgct
agtggccgctctaaggactatgaccatgagaagaagcgcaggaaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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