KEGG   Astyanax mexicanus (Mexican tetra): 103040310
Entry
103040310         CDS       T05042                                 
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11
  KO
K11273  chromosome transmission fidelity protein 1 [EC:5.6.2.7]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    103040310 (ddx11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103040310 (ddx11)
Enzymes [BR:amex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103040310 (ddx11)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    103040310 (ddx11)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 ResIII DEAD DUF5591
Other DBs
NCBI-GeneID: 103040310
NCBI-ProteinID: XP_022535241
Ensembl: ENSAMXG00000003800
Position
18:complement(7241978..7261868)
AA seq 902 aa
MENGAPASRFPFPFKPYTIQERFMESLYAALEQGKVGIFESPTGTGKSLSLICGALTWLR
DHEEKKKEEAARLLQEKEVERKGDGDGGEKDCNGDKSGGSGAATEPDWVSDFVQKRAERE
IVNKLKDEEIKRKRREERLEMIRHNAQLKYAMKRKTNEDNEAEKLLQLSKQELSSEEKSH
EEEEEGLIVADYESDDEATPKPRICDEDDDDDLEEEHVTKIYYCSRTHSQLAQFVHEVQK
SPYGSTVSLVNLGSRQNLCVNPDVTRLGSVQLINDRCMELQKNKHDKQSKTDLEPKRRRS
IAKATCPFTGYEKMMAMRDEVLVKVRDIEQLVQHGRGTHTCPYYSTRLAIPAAQVVVLPY
QTLLHAATRKASGIKLKDQIVVIDEAHNLTDTITALHSAEVNGAQLCRAHSQLSQYCERY
RSRLKAKNLMYIKQILFVLEGLVRTLGGKVSLNPVTQSTQPGTELLTINDFLFRAQIDNI
NLFKVQKYFEKSMISRKLCGFVEKYEGNGVNTHSNSVNKENRNTEGLGRFLQSLQNKPAA
AAEQQAAVDDRPSMSSPMMLVESFLFALTNSNKDGRVVMDKQAYLSQSSLKFLMLNAAVH
FAQVVQECRAVIIAGGTMQPVADFKEQLLLSAGLSEERIAEFSCGHVIPPENILPIVLCA
GPSGQGLEFTFQTRDTPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYEKRILGHWEKTGI
LQRLAAKKKVFQEPKKASQVEQVLSEYSKCIQRCSNTGGGQTGALLFSVVGGKMSEGINF
SDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKNMPHIDGRSPGKALIENLCMKAVNQSIG
RAIRHRGDYACIVLCDRRYSRSGTLQKLPQWIRSSTHTHSSFGPAFASIRKFFLEKRQTQ
QL
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggagaacggggcgcccgcttctcggttcccgttcccgtttaaaccgtacacgatccag
gagcgctttatggagtcgctgtatgccgcactggaacagggcaaagttggcattttcgag
agccccaccggcacgggcaagtctctgagtctgatctgtggcgctctgacgtggctcaga
gaccatgaggagaagaagaaggaggaggctgccagacttctgcaggagaaagaggtggag
aggaaaggagatggagatggaggagagaaggactgtaatggagacaagagtggtggcagc
ggagcagcgacagaaccagactgggtgtctgattttgtgcaaaaaagagcagagcgagag
atagtgaataaattaaaggatgaagagattaagcgaaagagaagagaagaaaggctggag
atgatcagacacaatgctcagcttaaatatgcaatgaaaagaaagaccaatgaggataat
gaggcagaaaagttgctgcagctcagtaagcaggagctaagctctgaggagaaatctcat
gaagaggaagaggaggggcttattgttgcagattatgaaagtgatgatgaagccacaccc
aaacccaggatctgtgatgaagatgatgatgatgatctagaggaagagcatgtcactaag
atatactactgcagccgtacgcactcacagctggcccagtttgtgcatgaagtgcagaaa
agcccatatgggtccacagtcagcttggtcaatttgggctctagacagaatctgtgtgtt
aatcccgacgtgacgcgtctggggagtgttcagctgatcaatgaccgctgtatggagctg
caaaaaaacaaacatgacaagcagagcaagacagacttggagccgaagcgccgccgcagc
atcgccaaggcaacctgccccttcacagggtatgagaagatgatggcgatgcgagacgag
gtgctggtgaaagtgcgggacatcgagcagctggtgcagcacggcagaggcacgcacacc
tgcccctattacagcacacgcctcgctattcctgcagctcaggtggtggtgctgccctat
cagacgctgctgcatgcagccactcgcaaagcatcaggaatcaaactgaaggaccagatt
gtcgtcattgatgaggcccacaatctgacagatacaatcacagcactgcacagtgctgag
gtcaatggagcacagctctgcagggctcactctcagctctcccagtactgtgaacgctac
aggagtcgcctaaaggccaagaatctgatgtacatcaagcagatcctgtttgtgcttgag
gggcttgtgcggactcttggaggaaaagtgtcactgaatcctgttactcagagcactcag
ccggggacggaactgctgaccatcaatgacttcctgttcagagcccagatagacaatata
aatctattcaaggttcagaaatattttgagaagagcatgatcagcaggaagctgtgtggt
tttgtagagaagtatgaagggaatggtgtaaacacacactcaaattctgtgaacaaggag
aatcgcaatactgaaggacttgggcgcttccttcagagcctccagaacaaacctgcagct
gctgcagaacagcaggcagcagtagacgacaggccgtctatgtcctcccccatgatgctg
gttgaaagcttcctctttgctctcacgaactccaacaaagatggcagagtggtgatggac
aaacaagcatatctgtctcagagcagtctgaagttcctcatgctgaatgcagcggttcac
tttgcgcaggttgtccaagaatgcagggctgttatcatcgctggtgggacaatgcagcct
gttgcagattttaaggagcagcttctgctgtcagcagggctctctgaggagcgcattgca
gagttctcttgtggtcatgtcataccgccagagaacattctacccatagtcctttgcgct
gggccctctggacaaggactggagtttacgttccagaccagagacacaccacagatgatg
gaagagacaggacgtgttctgtccaacctttgtaatgtggtcccagggggtgtggtctgt
ttctttccctcctatgagtatgagaaaagaattctgggtcattgggagaaaactggtatt
cttcaacgtcttgcagccaaaaagaaggtttttcaggagccaaagaaagccagtcaggtg
gaacaggtgctgtctgagtactcaaaatgtatccagcgctgtagcaatactggaggaggg
cagacaggggcgctgttgttttctgtggttggagggaagatgagtgaagggatcaacttc
tctgatgacttgggcaggtgtattgtgatggttgggatgccatatcccaacatcaagtcc
ccggagcttcaggaaaagatggcatacctggataaaaacatgcctcacattgatggcaga
agtcctgggaaagctttaattgaaaatctgtgcatgaaggctgtaaatcagtccataggc
cgggcgattcgtcaccggggtgattacgcctgcattgtactttgtgatcggcgctactcg
cgctctggcacgctgcagaagcttccgcagtggatcagatccagcacacacacccacagc
agcttcggcccagcctttgccagcatcaggaagtttttcctggagaagcggcaaacgcag
cagctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system