KEGG   Actinosynnema mirum: Amir_0004
Entry
Amir_0004         CDS       T00957                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
ami  Actinosynnema mirum
Pathway
ami03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Amir_0004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ami03400]
    Amir_0004
DNA repair and recombination proteins [BR:ami03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Amir_0004
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 SbcC_Walker_B AAA_29 ABC_ATPase ABC_tran DUF2813
Other DBs
NCBI-ProteinID: ACU33978
UniProt: C6WCF7
Position
4728..5843
AA seq 371 aa
MYVRHLQVTDFRSWEHADLAFEPGVNVLVGRNGHGKTNLVEALGYVATLGSHRVASDAPL
IRSGAQRAVVRTAVVNEGRELLVELEITPGRANRARVNRGPVPRPRDVLGILRTVLFAPE
DLSLVRGDPGERRRFLDELLTLRAPRYAGVRSDYERVLRQRGALLKTVRSVRSAELGTLD
VWDGHLAKHGAELLAARLDLVAAIAPHAAAAYAEVAPESRPALLSYRSSLGEAFPGTHDR
EVLEDALLAELHRLRPQEIDRGVCLVGPHRDDLELSLGELPAKGYASHGESWSFALALRL
GAYELLREEGAEPVLVLDDVFAELDRGRRRQLAKVAAAAEQVFITAAVAEDVPEELDAAR
FHVGHGEVRRD
NT seq 1116 nt   +upstreamnt  +downstreamnt
ttgtacgtccggcacctccaggtgaccgacttccggtcgtgggagcacgcggacctggcc
ttcgagccgggggtcaacgtgctggtcggtcgcaacggccacggcaagacgaacctggtc
gaagcgctcggctacgtcgccacgctcggatcgcaccgggtggcgtcggacgcgccgctg
atccggagcggcgcccagcgcgccgtcgtccggacggcggtggtcaacgaggggcgcgag
ctcctcgtcgaactggagatcactccgggcagggcgaaccgggcgcgggtcaaccgcggc
ccggttccccggccccgcgacgtgctcggcatcctgcgcacggtgctcttcgcgccggag
gacctgtcgctggtccggggcgaccccggcgagcgcaggcggttcctggacgagctgctg
accctgagggcgccccggtacgccggggtgcgctcggactacgagcgggtgctgcggcag
cgcggggcgctgctgaagacggtgcgctcggtgcggtcggcggagctgggcacgctcgac
gtgtgggacgggcacctggccaagcacggggccgagctgctcgcggccaggctcgacctg
gtcgccgcgatcgccccgcacgccgccgccgcgtacgccgaggtggcccccgagtcgcgg
cccgcgctgctgtcctaccggtcgagcctgggggaggcgttccccggcacgcacgaccgg
gaggtgctggaggacgcgctgctcgccgagctgcaccggctgcgcccgcaggagatcgac
cggggcgtgtgcctggtcggcccgcaccgggacgacctggagctgtcgctgggggagctg
cccgcgaagggctacgccagccacggcgagtcgtggtcgttcgcgctcgcgctgcgcctg
ggcgcgtacgagctgctgcgcgaggagggtgccgagccggtgctggtgctcgacgacgtg
ttcgccgagctggaccggggcaggcggcggcagctggcgaaggtggccgcggcggccgag
caggtgttcatcaccgccgccgtcgccgaggacgtgcccgaggagctggacgccgcgcgg
ttccacgtcggccacggggaggtgcggcgtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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