KEGG   Advenella mimigardefordensis: MIM_c18190
Entry
MIM_c18190        CDS       T03016                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
amim  Advenella mimigardefordensis
Pathway
amim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MIM_c18190 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amim03400]
    MIM_c18190 (uvrB)
DNA repair and recombination proteins [BR:amim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MIM_c18190 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MIM_c18190 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin AAA_22 DUF87
Other DBs
NCBI-ProteinID: AHG63899
UniProt: W0PAM6
Position
2073316..2075337
AA seq 673 aa
MSEAGFIEFADSPFQLYQPYPPAGDQPAAIEALTQGVDDGLMYQTLLGVTGSGKTYTMAN
VIARLGRPALVLAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLVLRTGDHTPRQE
ILARLVSMQYERNDVDFSRGTFRVRGEVIDIFPAESAELAVRLSLFDDELESIDLFDPLT
GKIRQRVPRFTVYPSSHYVTPRDTVLRAIETIKEELRDRTKFFVDNNQLVEAQRIEQRTR
FDIEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPQDALMFFDESHWMMGQLRAMY
RGDRSRKETLVQFGFRLPSAMDNRPLKMEEFEQRVRQSIFVSATPSDYENEHSDNVVRQV
VRPTGLVDPMVEVRPALTQVDDLLGEAKLRIAIGERVLVTTLTKRMAEDLTDYLTESGLK
VRYLHSDIDTVERVEIIRDLRLGQFDILVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGKAILYADRITDSMHRAMEETEKRRNLQMAFNAEHGIVPQGVRKS
VREMIDGVIQDAPEASTAEEIRLESLLVDEKALAKEIRRLEKQMQDHARNLEFEQAAAAR
DQLTRLKERVLLR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagcgaagccggatttatcgaatttgcagacagcccgtttcagctataccagccctat
ccgccagccggcgatcagcccgccgcgattgaagccttaacgcaaggcgttgatgatggt
ttgatgtatcagacgctacttggcgttacaggatcgggcaaaacctacaccatggccaac
gtgatcgcacgcctggggcgcccggcgctggtgctggcccccaacaaaacactggccgct
cagctgtattcagagtttcgggaattttttccgcgcaatgccgtggaatacttcgtgtct
tactacgattactatcagcccgaggcctatgtgcccacgcgtgatctgttcattgaaaaa
gattcgtccattaatgaacatatagaacagatgcgtctgtcggcaaccaaaagcctgctg
gaacggcgcgataccattattgtgggtacggtttcctgtatttacggtattggtaatccc
ggagattaccacgctatggtgcttgtgcttcgcacgggtgatcacacgccgcgtcaggaa
atcctggcgcgcctggtgtctatgcagtatgagcgcaatgatgttgatttctcgcggggt
accttccgggtgcgtggcgaagtgattgatatcttcccggccgagagtgccgaactggcg
gtcaggctaagcctgtttgatgacgagctggagagtattgacctgttcgatccgctaacc
ggcaaaatccgccagcgcgtcccccggttcaccgtctatccgagttcgcattatgtgacg
ccgcgcgatacggtgttgcgggcgattgaaaccatcaaggaagagctgcgcgatcgcacc
aaattttttgtagataataatcaactggttgaggcgcagcgcatcgaacaacgcacccgg
tttgatattgaaatgctccaggagctgggtttttgcaagggaatcgagaactattcccgc
catctgtccggcgcggcaccgggcgagccaccgccaacgcttatcgattatctgccgcag
gatgcccttatgttctttgatgagagtcactggatgatgggccagttgcgcgccatgtat
cgcggtgaccggtcccgcaaggaaacgctggtgcagtttggttttcgtctgccgtctgcg
atggacaaccggccactgaagatggaagagttcgagcagcgagtccggcagagcattttt
gtgtcggccacgccttcagactatgaaaatgagcattccgacaacgtggtgcgccaggtg
gtacgacctaccggcctggttgaccccatggttgaggtacggccggcgctcactcaggtg
gacgacctgctgggtgaggccaagttgcgtatcgccattggcgagcgggtgctggttacc
acgctgaccaagcgcatggcagaggatctgaccgattatctgaccgaaagcggcctgaaa
gtacgctatctgcattcggatattgatacggtcgagcgggtggaaattatccgcgacttg
cgcctggggcaattcgacattctggtgggcatcaatctgctgcgtgagggtctggatatt
cccgaggtctctttggtggcgattctggatgcagataaggaaggttttctgcgttccgaa
cgcagtctgatccagacgattggccgcgcggcccgaaatctgaatggtaaagccattctg
tatgcggatcgtattaccgactccatgcatcgcgccatggaagagaccgaaaagcgccgt
aatctgcagatggcgtttaatgccgagcacgggattgtgccgcagggcgtgcgcaagtcg
gtccgcgaaatgattgatggcgttattcaggatgcacccgaggcaagcactgccgaagag
atccgtcttgaatcgctgctggtggatgaaaaggcgctagccaaagagattcgccggctg
gaaaagcagatgcaggatcatgcccgcaatctggaattcgaacaagccgcagcggcccgc
gatcaattgactcgactcaaggaaagggtgctcttgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system