KEGG   Alligator mississippiensis (American alligator): 102558277
Entry
102558277         CDS       T03087                                 
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
  KO
K10630  RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:2.3.2.31]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04217  Necroptosis
amj04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    102558277
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    102558277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amj04121]
    102558277
Enzymes [BR:amj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     102558277
Ubiquitin system [BR:amj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    102558277
  Multi subunit Ring-finger type E3
   LUBAC complex
    102558277
SSDB
Motif
Pfam: zf-RanBP zf-RING_2 zf-RING_UBOX Sharpin_PH zf-C3HC4 ubiquitin zf-RING_5 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 102558277
NCBI-ProteinID: XP_019348288
Position
Un
AA seq 536 aa
MVLTFEEEREAQKWWTVVSSSLREVQKAAETTGILAAQPPPLSSVIGSPAAAPEEEASLE
LSKTEDLALRLSLAIEVGNEQAASQCAMALARQQASLRIQPKESSHPTNEISMKVCVEDA
TCSANITLRVHTHMTVATLKQQVFQDYKFHPSVQRWIIGQCLCVDERTVSSYGIRKDGDT
AFLYLLSVKQAGLSEQRFQEDLTQAQAALRPAASLTDSAGVDDKRRCSTLPAAAPRKVWV
SDSGRKMNIDEISNHLNLLQVNNLLYNHPLGALATAAPPSPVQTGWSCPKCTFINKPTRP
GCEMCSADRPPGYVVPGGYTPDEMELWRMQQEKDGIRQYQQALEDQRLQNFQRLKQLDEA
ALVPNQETLECLICYQTVAPGAGVLLRECLHNFCRDCLRQVISYSEEPQVACPFRDDTYA
CSSHLQEREIRAVSPLRRGGPAGPASPPHRAPSEQGLEQLPGPARRERPRLLGLERGGLK
GERSEVWSITESQWRGAGRELWGHIQSKPCLSQDQPRSTPQTNPVSDLGAAQHSHP
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggtgctcaccttcgaggaagagcgggaggcccagaagtggtggacggtggtgagcagc
tccctacgggaggtgcagaaagctgctgagaccaccggcatcctggcagcacagcctcct
ccgctgtcctcggtcattggcagccctgcagccgctccggaggaggaggcgtccctggag
ctttctaagacagaggacctggcgctccgcctctcccttgcaatcgaggtggggaatgag
caggcagcctcgcagtgtgccatggcgctggctcggcagcaagcctctctgcggatccag
cccaaggagtccagccaccccaccaacgagatcagcatgaaggtctgcgtggaggatgcc
acttgctcggccaacatcaccctccgggtccacacgcacatgactgtcgccacgctcaag
cagcaggttttccaggactacaagttccaccccagcgtgcagcgctggatcattgggcag
tgcctgtgtgtggacgagcgcacggtcagctcctatggcatccggaaggacggcgacaca
gcgttcctctacctgctgtcggtcaagcaggccggcctgtcagagcagcgcttccaggag
gacctgacccaggcccaggctgcgctgcgtcctgcggcctccctcactgacagtgccggc
gtggacgacaagcgcagatgcagcaccctgcctgccgcagcgccccggaaagtctgggtc
agcgacagcggcaggaagatgaacatcgacgagatcagcaaccatctcaacctgctgcag
gtcaacaacctcctgtacaaccacccgctgggtgccttggccaccgcagcccccccttcg
cccgtgcagacgggctggtcctgccccaagtgcaccttcatcaacaagcccacgcgcccc
gggtgtgagatgtgcagtgcggaccggccacctggctacgtggtgcctggtggctacacg
cccgacgagatggagctgtggcggatgcagcaggagaaggacgggatccggcagtaccag
caggccctggaggatcagcggctgcagaacttccagcgcctgaagcagctggacgaggcg
gcgctggtgcccaaccaggagacgctggagtgcctcatctgctaccagaccgtggcgccg
ggggcaggtgtgctgctgcgcgagtgtctgcacaacttctgcagggactgcctgcggcag
gtgatcagctacagcgaggagccgcaggtcgcctgccccttccgcgacgacacctacgcc
tgcagcagccacctccaggagcgcgagatccgggcggtgagtcccctgcgccgggggggt
cccgcgggaccagcctctccgccccaccgggccccaagcgagcagggtctggagcagctg
ccaggcccggcgagacgggagcggccgagactcctcggtctggagaggggagggttgaag
ggggagaggagcgaggtctggagcatcacggagtcccagtggcgcggggcgggcagggag
ctgtggggtcacatccagtccaagccctgcctgagccaggatcagccccgttcaaccccc
cagacaaaccctgtgtctgaccttggagccgcgcaacacagtcacccctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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