KEGG   Alligator mississippiensis (American alligator): 102560337
Entry
102560337         CDS       T03087                                 
Symbol
LEF1
Name
(RefSeq) lymphoid enhancer binding factor 1
  KO
K04492  lymphoid enhancer-binding factor 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04310  Wnt signaling pathway
amj04520  Adherens junction
amj04916  Melanogenesis
amj05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    102560337 (LEF1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    102560337 (LEF1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    102560337 (LEF1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102560337 (LEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amj03000]
    102560337 (LEF1)
Transcription factors [BR:amj03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    102560337 (LEF1)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 102560337
NCBI-ProteinID: XP_006272950
Position
Un
AA seq 412 aa
MPQLSGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVHES
EIIPSGAGHEVSRQAQAQESYHDKSRELPEEGKHPDSSLYSKGPSYSGYSGYIMMPNMNN
DAYISNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQ
GMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYPISSGFRQPYPSSLSVDPSMSRF
SHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHNDSELMHVKPQHEQRKEQEPKRPHIKKP
LNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQL
YPGWSARDNYGKKKKRKREKLQESASGGKRNAFSTCKTKAATPGPLLEMEAC
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgccccagctgtcgggcggcggcggcggcgggggggacccggagctgtgcgccacggac
gagatgatcccgttcaaggacgagggcgacccgcagaaggagaagatcttcgccgagatc
agccaccccgaggaggagggagacctggccgacatcaagtcctccctggtccacgagtcc
gagatcatccccagcggcgccgggcacgaggtttccaggcaagcacaagcccaggaatca
taccatgataaaagccgagaacttcctgaagaaggaaaacacccagacagcagtttatac
agcaagggcccatcatactctggttattcggggtatatcatgatgccaaatatgaataac
gacgcatacatatctaatggatctctgtcgccacccatccctagaacatcaaacaaggtg
ccagtggtgcagccttcccatgcggttcaccctctcaccccacttatcacctacagcgac
gagcacttttccccagggtcacacccttcgcacatcccctcagacgtcaactcaaagcaa
ggcatgtctagacatcctccggctcctgatatcccaaccttttatccattgtctccaggt
ggtgttggacagataacaccaccacttggctggcaaggtcagcctgtatatcccatctcg
agtggatttaggcagccctacccatcctcactctcagtcgacccttccatgtccaggttt
tcacatcatatgattcctggacctccaggccctcacacaactggaatccctcatccagct
attgtaacgcctcaagtcaaacaagaacatccgcacaatgacagcgaactaatgcatgtg
aagcctcagcatgaacagagaaaagagcaagagccaaaaagacctcacattaagaaacct
ctgaatgctttcatgttgtatatgaaagaaatgagagcaaatgttgtagcggagtgtact
ctgaaagagagcgcagctatcaaccagattcttggcagaaggtggcacgctctctcccgt
gaagaacaagctaaatattatgaactagctcgtaaagaaaggcagctacacatgcagctt
tatccaggctggtctgcaagagacaactatgggaagaaaaagaagaggaagagagaaaag
ctacaggagtcagcatcaggtgggaaaagaaatgctttctcgacatgcaaaaccaaggca
gcaacaccaggaccccttctggagatggaagcttgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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