KEGG   Alligator mississippiensis (American alligator): 102560887
Entry
102560887         CDS       T03087                                 
Symbol
CLCA2, CLCA1
Name
(RefSeq) chloride channel accessory 2
  KO
K05028  calcium-activated chloride channel regulator 2
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102560887 (CLCA2)
Ion channels [BR:amj04040]
 Chloride channels
  Chloride channel, calcium-activated (CaCC)
   102560887 (CLCA2)
SSDB
Motif
Pfam: CLCA VWA_2 VWA DUF630
Other DBs
NCBI-GeneID: 102560887
NCBI-ProteinID: XP_006277580
Position
Un
AA seq 934 aa
MSRGRGAGAALRPLALLALLALALAGGGDAAVLLQDGAYDGLLLAVHPRVPEDPKLLASI
QDMITEASFYLFSATKNRFYFRNAKILIPPTWKANNYEKPKQESYDKADVIVAAPYWKHG
DDPYTLQYGECGKMGKYIHFTPTFLLNDKLIAVYGSRGRVFVHEWAHLRWGVFDEYDSDR
PFYITGQNRVEVTRCSSNLTGIYVCEKKSCTEGNCVINQLTGLFIEGCAFIHERNQTAAA
SIMYMQSLSSVAEFCDESNHNREAPNMQNRMCDYRSTWEVIMKSMDFKNNPPLNTTSLLP
PPTFSLLQKRDRVVCLVLDVSNSKDGTNWINQLHQAAELYLLQIVEENSYVGIVTFSHSG
EIKTQLRQIVSNDIRTQLASFLPTAPTSEGTNVCAGLQLAFEVIRKHDGSIYGSEIILVT
DGEDSGVKKCFSDVINSGSVIHTIVLGQSAAKEIEQFSRETGGLNFFVSDRLNSNDLIDA
FCGILSGSGDTFNQSIQIESTGESTQGYKQFRRTVTIDSTVGRDTFFVVTWQTTEPPKIT
LLDPHGKNYTNENFSIDIIFHIARLQIPGIAEAGKWTYTLTNTHLSPQVLTITVTSRAAN
STIPAITVKAHMNRDTNYYPSPMVAYAQVGQGLSPVLGANVTAIIEPENGDPIILELFDN
GAGSDVVRNDGVYSKYLFSFRGNGKYNLKVRVQVSEIIKLHAATPWSHALYIPGYVENGT
IQMNGPRPSVTSNDDIQIKVGGFSRTISGGYFTVSEVPTSPDTDVFPPCKITDLSAKTED
DKVILSWTAPGGDLDQGQAATYEIRTSESPLELRDNFDEATVVNTSSLTPHYAGYKEIFS
FKPAAFATRNTTIIYVAVCAIDKASLHSDISNIAQAVMFVPPMDFLTANNKYSVSTIILI
LFGLLATVCLITSVTLCVLKKRRKCLLETATKLL
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagccgcggacgcggggctggggccgcgctccggccgctggcgctgctggcgctgctg
gcgctggctctggcgggcggcggggacgccgcggtgctgctgcaggacggcgcctacgac
gggctgctcctcgccgtccacccgcgggtgcccgaggacccgaagctcctcgcgagcatc
caggatatgataacagaagcatctttctatttattcagtgctacaaaaaatagattttat
tttaggaatgcaaagattttaatacctcctacatggaaagcaaacaattatgagaaacca
aaacaagagtcctatgacaaggcagatgtcatagttgctgctccttattggaaacatgga
gatgacccatataccctacaatatggagaatgtggaaaaatgggaaaatatatacatttc
acgcctaccttcctattaaatgataagttgattgctgtctatggatcacggggcagagtt
tttgtccatgagtgggcccaccttcgatggggggtgtttgatgaatatgatagtgacagg
cctttctatataactggacaaaatcgagttgaagttacaagatgctcatctaatctcact
ggcatctatgtctgtgaaaaaaaatcctgcactgaaggaaattgtgtcattaatcaacta
acaggactttttattgaaggatgtgcatttattcatgagagaaatcaaactgcagcagca
tcaataatgtacatgcaaagcttatcatctgtggctgaattctgtgatgaaagtaaccat
aatagagaagctcccaatatgcagaacagaatgtgtgactatagaagcacgtgggaagta
ataatgaaatccatggattttaagaacaatcctccactgaatactaccagccttctacct
cctcctaccttctcattgctgcagaagagagatagggtggtctgcctggttcttgatgtt
tcaaacagcaaggatgggactaattggatcaatcagctgcatcaagcagcagaactgtat
cttctacagatcgtggaagaaaattcttatgttggtattgtcactttcagtcactcggga
gagatcaaaactcagttgcgtcaaattgtcagcaatgatataaggacacagcttgcttca
ttcctaccaactgctccaactagtgagggaacaaatgtttgcgcaggcttgcagctggca
tttgaggtgatcagaaaacatgatggaagtatatatggctcagaaattatattagtgaca
gatggagaagacagtggtgtaaagaaatgcttttctgatgtgattaacagtggatcagtc
atccataccattgttctgggacagtctgctgcaaaagaaattgaacagttttctagagag
acagggggattaaacttttttgtctcagatagactgaattccaatgacctcattgatgct
ttctgtggaattttatcaggaagtggagatacctttaatcagtccattcagattgaaagt
actggtgagagtacccagggttataaacagttcagaaggacggtgactattgatagtaca
gtgggaagggataccttctttgtagttacctggcagaccactgaaccaccgaaaataact
cttcttgatccccatggaaaaaactacaccaatgagaacttcagcattgatattattttc
catatagctcgtcttcagattcccggcattgcagaggctgggaagtggacatacacactc
actaatactcatctgtcccctcaagtcctaacaataacagtaacttcccgagcagcaaat
tctacaatacctgcaataactgtgaaagcccacatgaacagggatacaaactactaccct
agtccgatggttgcttatgcacaagttggtcaagggctttcacctgttcttggagcaaat
gtgaccgccattatcgaaccagagaatggagatccaattattctggaactttttgacaat
ggtgcagggtcagatgttgtccggaatgatggggtctattccaagtatttgttctctttc
cgtggaaatgggaaatacaacctgaaagtccgggttcaagttagcgagatcatcaaactg
catgctgcaacgccatggagtcatgctttgtatataccaggttacgtagaaaatggtacg
atccagatgaatggaccaagaccctcagttacaagtaatgatgatattcaaatcaaagta
ggaggcttcagtagaaccatctcaggaggttactttacagtgtctgaagtaccaacgagc
cctgatactgatgtgtttccaccatgtaaaattactgatcttagtgccaaaacagaagat
gataaggtcattttatcatggacagcgccagggggtgatcttgaccagggacaagctgca
acttatgaaatacgaacaagtgaaagtcctctggaattaagagacaactttgatgaggct
acagttgtgaatacctccagtctgactcctcattatgcgggctacaaggaaatattttca
tttaaaccagcagcttttgcaacaagaaacaccacaataatttatgtggctgtatgtgcc
attgataaagcctctctgcactctgatatatctaatatagcacaagcagtaatgtttgtt
cccccaatggactttttaactgctaataataagtatagtgtctcaactatcatcttgata
ttatttggcctattagcaacagtttgtcttattacaagtgtgaccttgtgtgttttaaaa
aaaagaagaaaatgtctattagagactgcaacaaagttactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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